Gene : Eucgr.A02558 E. grandis v2.0
Defline:  (1 of 1) PTHR14021:SF15 - IRON-SULFUR CLUSTER CO-CHAPERONE PROTEIN HSCB, MITOCHONDRIAL Genomic Order:  2291
Name:  ? Eucgr.A02558 Secondary Identifier:  ? PAC:32048205
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.A02558 0.5kb upstream 0.5kb upstream 4741 true Chr01: 40759837-40764577 Eucalyptus grandis
Eucgr.A02558 0.5kb upstream 0.5kb upstream 500 false Chr01: 40764078-40764577 Eucalyptus grandis
Eucgr.A02558 0.5kb downstream 0.5kb downstream 4741 true Chr01: 40759337-40764077 Eucalyptus grandis
Eucgr.A02558 0.5kb downstream 0.5kb downstream 500 false Chr01: 40759337-40759836 Eucalyptus grandis
Eucgr.A02558 1.0kb upstream 1.0kb upstream 5241 true Chr01: 40759837-40765077 Eucalyptus grandis
Eucgr.A02558 1.0kb upstream 1.0kb upstream 1000 false Chr01: 40764078-40765077 Eucalyptus grandis
Eucgr.A02558 1.0kb downstream 1.0kb downstream 5241 true Chr01: 40758837-40764077 Eucalyptus grandis
Eucgr.A02558 1.0kb downstream 1.0kb downstream 1000 false Chr01: 40758837-40759836 Eucalyptus grandis
Eucgr.A02558 2.0kb upstream 2.0kb upstream 6241 true Chr01: 40759837-40766077 Eucalyptus grandis
Eucgr.A02558 2.0kb upstream 2.0kb upstream 2000 false Chr01: 40764078-40766077 Eucalyptus grandis
Eucgr.A02558 2.0kb downstream 2.0kb downstream 6241 true Chr01: 40757837-40764077 Eucalyptus grandis
Eucgr.A02558 2.0kb downstream 2.0kb downstream 2000 false Chr01: 40757837-40759836 Eucalyptus grandis
Eucgr.A02558 5.0kb upstream 5.0kb upstream 9241 true Chr01: 40759837-40769077 Eucalyptus grandis
Eucgr.A02558 5.0kb upstream 5.0kb upstream 5000 false Chr01: 40764078-40769077 Eucalyptus grandis
Eucgr.A02558 5.0kb downstream 5.0kb downstream 9241 true Chr01: 40754837-40764077 Eucalyptus grandis
Eucgr.A02558 5.0kb downstream 5.0kb downstream 5000 false Chr01: 40754837-40759836 Eucalyptus grandis
Eucgr.A02558 10.0kb upstream 10.0kb upstream 14241 true Chr01: 40759837-40774077 Eucalyptus grandis
Eucgr.A02558 10.0kb upstream 10.0kb upstream 10000 false Chr01: 40764078-40774077 Eucalyptus grandis
Eucgr.A02558 10.0kb downstream 10.0kb downstream 14241 true Chr01: 40749837-40764077 Eucalyptus grandis
Eucgr.A02558 10.0kb downstream 10.0kb downstream 10000 false Chr01: 40749837-40759836 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124063168 5270 Rosid View MSA
123740445 5271 Pentapetalae View MSA
122789234 5272 Eudicot View MSA
122043255 5273 Angiosperm View MSA
121346465 5274 Embryophyte View MSA
123425339 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.01362 0.0 5.93823    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.37221 0.0 5.05304    
cufflinks 0.973049 0.0 3.2019   Low
cufflinks 2.69901 0.0 7.62032    
cufflinks 5.22727 0.0 13.2831   High

0 Strain