Gene : Eucgr.A02538 E. grandis v2.0
Defline:  (1 of 2) PTHR23024:SF102 - CARBOXYLESTERASE 15-RELATED Genomic Order:  2273
Name:  ? Eucgr.A02538 Secondary Identifier:  ? PAC:32048726
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-6303 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.A02538 0.5kb upstream 0.5kb upstream 4010 true Chr01: 40633003-40637012 Eucalyptus grandis
Eucgr.A02538 0.5kb upstream 0.5kb upstream 500 false Chr01: 40633003-40633502 Eucalyptus grandis
Eucgr.A02538 0.5kb downstream 0.5kb downstream 4010 true Chr01: 40633503-40637512 Eucalyptus grandis
Eucgr.A02538 0.5kb downstream 0.5kb downstream 500 false Chr01: 40637013-40637512 Eucalyptus grandis
Eucgr.A02538 1.0kb upstream 1.0kb upstream 4510 true Chr01: 40632503-40637012 Eucalyptus grandis
Eucgr.A02538 1.0kb upstream 1.0kb upstream 1000 false Chr01: 40632503-40633502 Eucalyptus grandis
Eucgr.A02538 1.0kb downstream 1.0kb downstream 4510 true Chr01: 40633503-40638012 Eucalyptus grandis
Eucgr.A02538 1.0kb downstream 1.0kb downstream 1000 false Chr01: 40637013-40638012 Eucalyptus grandis
Eucgr.A02538 2.0kb upstream 2.0kb upstream 5510 true Chr01: 40631503-40637012 Eucalyptus grandis
Eucgr.A02538 2.0kb upstream 2.0kb upstream 2000 false Chr01: 40631503-40633502 Eucalyptus grandis
Eucgr.A02538 2.0kb downstream 2.0kb downstream 5510 true Chr01: 40633503-40639012 Eucalyptus grandis
Eucgr.A02538 2.0kb downstream 2.0kb downstream 2000 false Chr01: 40637013-40639012 Eucalyptus grandis
Eucgr.A02538 5.0kb upstream 5.0kb upstream 8510 true Chr01: 40628503-40637012 Eucalyptus grandis
Eucgr.A02538 5.0kb upstream 5.0kb upstream 5000 false Chr01: 40628503-40633502 Eucalyptus grandis
Eucgr.A02538 5.0kb downstream 5.0kb downstream 8510 true Chr01: 40633503-40642012 Eucalyptus grandis
Eucgr.A02538 5.0kb downstream 5.0kb downstream 5000 false Chr01: 40637013-40642012 Eucalyptus grandis
Eucgr.A02538 10.0kb upstream 10.0kb upstream 13510 true Chr01: 40623503-40637012 Eucalyptus grandis
Eucgr.A02538 10.0kb upstream 10.0kb upstream 10000 false Chr01: 40623503-40633502 Eucalyptus grandis
Eucgr.A02538 10.0kb downstream 10.0kb downstream 13510 true Chr01: 40633503-40647012 Eucalyptus grandis
Eucgr.A02538 10.0kb downstream 10.0kb downstream 10000 false Chr01: 40637013-40647012 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124067556 5270 Rosid View MSA
123751656 5271 Pentapetalae View MSA
122793188 5272 Eudicot View MSA
122047300 5273 Angiosperm View MSA
123428915 5275 Viridiplantae View MSA
121350136 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.30845 0.0 6.3604    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.871732 0.0 2.67944    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.418023 0.0 1.41516 Low  
cufflinks 15.6661 0.0 35.8076   High

0 Strain