Gene : Eucgr.A02534 E. grandis v2.0
Defline:  (1 of 1) PTHR10627//PTHR10627:SF43 - SCP160 Genomic Order:  2269
Name:  ? Eucgr.A02534 Secondary Identifier:  ? PAC:32046810
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.A02534 0.5kb upstream 0.5kb upstream 3235 true Chr01: 40596426-40599660 Eucalyptus grandis
Eucgr.A02534 0.5kb upstream 0.5kb upstream 500 false Chr01: 40599161-40599660 Eucalyptus grandis
Eucgr.A02534 0.5kb downstream 0.5kb downstream 3235 true Chr01: 40595926-40599160 Eucalyptus grandis
Eucgr.A02534 0.5kb downstream 0.5kb downstream 500 false Chr01: 40595926-40596425 Eucalyptus grandis
Eucgr.A02534 1.0kb upstream 1.0kb upstream 3735 true Chr01: 40596426-40600160 Eucalyptus grandis
Eucgr.A02534 1.0kb upstream 1.0kb upstream 1000 false Chr01: 40599161-40600160 Eucalyptus grandis
Eucgr.A02534 1.0kb downstream 1.0kb downstream 3735 true Chr01: 40595426-40599160 Eucalyptus grandis
Eucgr.A02534 1.0kb downstream 1.0kb downstream 1000 false Chr01: 40595426-40596425 Eucalyptus grandis
Eucgr.A02534 2.0kb upstream 2.0kb upstream 4735 true Chr01: 40596426-40601160 Eucalyptus grandis
Eucgr.A02534 2.0kb upstream 2.0kb upstream 2000 false Chr01: 40599161-40601160 Eucalyptus grandis
Eucgr.A02534 2.0kb downstream 2.0kb downstream 4735 true Chr01: 40594426-40599160 Eucalyptus grandis
Eucgr.A02534 2.0kb downstream 2.0kb downstream 2000 false Chr01: 40594426-40596425 Eucalyptus grandis
Eucgr.A02534 5.0kb upstream 5.0kb upstream 7735 true Chr01: 40596426-40604160 Eucalyptus grandis
Eucgr.A02534 5.0kb upstream 5.0kb upstream 5000 false Chr01: 40599161-40604160 Eucalyptus grandis
Eucgr.A02534 5.0kb downstream 5.0kb downstream 7735 true Chr01: 40591426-40599160 Eucalyptus grandis
Eucgr.A02534 5.0kb downstream 5.0kb downstream 5000 false Chr01: 40591426-40596425 Eucalyptus grandis
Eucgr.A02534 10.0kb upstream 10.0kb upstream 12735 true Chr01: 40596426-40609160 Eucalyptus grandis
Eucgr.A02534 10.0kb upstream 10.0kb upstream 10000 false Chr01: 40599161-40609160 Eucalyptus grandis
Eucgr.A02534 10.0kb downstream 10.0kb downstream 12735 true Chr01: 40586426-40599160 Eucalyptus grandis
Eucgr.A02534 10.0kb downstream 10.0kb downstream 10000 false Chr01: 40586426-40596425 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124070346 5270 Rosid View MSA
123742337 5271 Pentapetalae View MSA
122794270 5272 Eudicot View MSA
122048117 5273 Angiosperm View MSA
121310853 5274 Embryophyte View MSA
123348238 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.85488 0.0 20.8269    
cufflinks 3.53321 0.0 9.07814   Low
cufflinks 9.22446 0.0 21.6104    
cufflinks 9.92411 0.0 23.0965    
cufflinks 5.19893 0.0 12.8562    
cufflinks 13.7242 0.0 31.2267   High

0 Strain