Gene : Eucgr.B00144 E. grandis v2.0
Defline:  (1 of 11) 1.2.1.12 - Glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) / Triosephosphate dehydrogenase Genomic Order:  65
Name:  ? Eucgr.B00144 Secondary Identifier:  ? PAC:32061189
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

7 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis ANAEROFRUCAT-PWY Eucalyptus grandis pathologic  
Egrandis ANAGLYCOLYSIS-PWY Eucalyptus grandis pathologic  
Egrandis GLUCONEO-PWY Eucalyptus grandis pathologic  
Egrandis PWY-1042 Eucalyptus grandis pathologic  
Egrandis PWY-5464 Eucalyptus grandis pathologic  
Egrandis PWY66-399 Eucalyptus grandis pathologic  
Egrandis SUCSYN-PWY Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.B00144 0.5kb upstream 0.5kb upstream 4595 true Chr02: 852564-857158 Eucalyptus grandis
Eucgr.B00144 0.5kb upstream 0.5kb upstream 500 false Chr02: 856659-857158 Eucalyptus grandis
Eucgr.B00144 0.5kb downstream 0.5kb downstream 4595 true Chr02: 852064-856658 Eucalyptus grandis
Eucgr.B00144 0.5kb downstream 0.5kb downstream 500 false Chr02: 852064-852563 Eucalyptus grandis
Eucgr.B00144 1.0kb upstream 1.0kb upstream 5095 true Chr02: 852564-857658 Eucalyptus grandis
Eucgr.B00144 1.0kb upstream 1.0kb upstream 1000 false Chr02: 856659-857658 Eucalyptus grandis
Eucgr.B00144 1.0kb downstream 1.0kb downstream 5095 true Chr02: 851564-856658 Eucalyptus grandis
Eucgr.B00144 1.0kb downstream 1.0kb downstream 1000 false Chr02: 851564-852563 Eucalyptus grandis
Eucgr.B00144 2.0kb upstream 2.0kb upstream 6095 true Chr02: 852564-858658 Eucalyptus grandis
Eucgr.B00144 2.0kb upstream 2.0kb upstream 2000 false Chr02: 856659-858658 Eucalyptus grandis
Eucgr.B00144 2.0kb downstream 2.0kb downstream 6095 true Chr02: 850564-856658 Eucalyptus grandis
Eucgr.B00144 2.0kb downstream 2.0kb downstream 2000 false Chr02: 850564-852563 Eucalyptus grandis
Eucgr.B00144 5.0kb upstream 5.0kb upstream 9095 true Chr02: 852564-861658 Eucalyptus grandis
Eucgr.B00144 5.0kb upstream 5.0kb upstream 5000 false Chr02: 856659-861658 Eucalyptus grandis
Eucgr.B00144 5.0kb downstream 5.0kb downstream 9095 true Chr02: 847564-856658 Eucalyptus grandis
Eucgr.B00144 5.0kb downstream 5.0kb downstream 5000 false Chr02: 847564-852563 Eucalyptus grandis
Eucgr.B00144 10.0kb upstream 10.0kb upstream 14095 true Chr02: 852564-866658 Eucalyptus grandis
Eucgr.B00144 10.0kb upstream 10.0kb upstream 10000 false Chr02: 856659-866658 Eucalyptus grandis
Eucgr.B00144 10.0kb downstream 10.0kb downstream 14095 true Chr02: 842564-856658 Eucalyptus grandis
Eucgr.B00144 10.0kb downstream 10.0kb downstream 10000 false Chr02: 842564-852563 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124074393 5270 Rosid View MSA
123750297 5271 Pentapetalae View MSA
122795499 5272 Eudicot View MSA
122051601 5273 Angiosperm View MSA
121347451 5274 Embryophyte View MSA
123425180 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 48.1221 0.0 140.97 High Low
cufflinks 344.1 0.0 1669.04 High  
cufflinks 77.5763 0.0 241.902 High  
cufflinks 305.855 0.0 1434.08 High  
cufflinks 631.755 0.0 4067.21 High High
cufflinks 48.3733 0.0 135.703 High Low

0 Strain