Gene : Eucgr.B00120 E. grandis v2.0
Defline:  (1 of 1) PTHR12606//PTHR12606:SF38 - SENTRIN/SUMO-SPECIFIC PROTEASE Genomic Order:  44
Name:  ? Eucgr.B00120 Secondary Identifier:  ? PAC:32058865
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.B00120 0.5kb upstream 0.5kb upstream 3403 true Chr02: 646675-650077 Eucalyptus grandis
Eucgr.B00120 0.5kb upstream 0.5kb upstream 500 false Chr02: 649578-650077 Eucalyptus grandis
Eucgr.B00120 0.5kb downstream 0.5kb downstream 3403 true Chr02: 646175-649577 Eucalyptus grandis
Eucgr.B00120 0.5kb downstream 0.5kb downstream 500 false Chr02: 646175-646674 Eucalyptus grandis
Eucgr.B00120 1.0kb upstream 1.0kb upstream 3903 true Chr02: 646675-650577 Eucalyptus grandis
Eucgr.B00120 1.0kb upstream 1.0kb upstream 1000 false Chr02: 649578-650577 Eucalyptus grandis
Eucgr.B00120 1.0kb downstream 1.0kb downstream 3903 true Chr02: 645675-649577 Eucalyptus grandis
Eucgr.B00120 1.0kb downstream 1.0kb downstream 1000 false Chr02: 645675-646674 Eucalyptus grandis
Eucgr.B00120 2.0kb upstream 2.0kb upstream 4903 true Chr02: 646675-651577 Eucalyptus grandis
Eucgr.B00120 2.0kb upstream 2.0kb upstream 2000 false Chr02: 649578-651577 Eucalyptus grandis
Eucgr.B00120 2.0kb downstream 2.0kb downstream 4903 true Chr02: 644675-649577 Eucalyptus grandis
Eucgr.B00120 2.0kb downstream 2.0kb downstream 2000 false Chr02: 644675-646674 Eucalyptus grandis
Eucgr.B00120 5.0kb upstream 5.0kb upstream 7903 true Chr02: 646675-654577 Eucalyptus grandis
Eucgr.B00120 5.0kb upstream 5.0kb upstream 5000 false Chr02: 649578-654577 Eucalyptus grandis
Eucgr.B00120 5.0kb downstream 5.0kb downstream 7903 true Chr02: 641675-649577 Eucalyptus grandis
Eucgr.B00120 5.0kb downstream 5.0kb downstream 5000 false Chr02: 641675-646674 Eucalyptus grandis
Eucgr.B00120 10.0kb upstream 10.0kb upstream 12903 true Chr02: 646675-659577 Eucalyptus grandis
Eucgr.B00120 10.0kb upstream 10.0kb upstream 10000 false Chr02: 649578-659577 Eucalyptus grandis
Eucgr.B00120 10.0kb downstream 10.0kb downstream 12903 true Chr02: 636675-649577 Eucalyptus grandis
Eucgr.B00120 10.0kb downstream 10.0kb downstream 10000 false Chr02: 636675-646674 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124074830 5270 Rosid View MSA
123753730 5271 Pentapetalae View MSA
122794426 5272 Eudicot View MSA
122049176 5273 Angiosperm View MSA
123429184 5275 Viridiplantae View MSA
121311282 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.44902 0.0 9.59107   High
cufflinks 2.75894 0.0 7.81716    
cufflinks 2.52955 0.0 8.98735    
cufflinks 2.08708 0.0 6.0389    
cufflinks 1.8895 0.0 5.74363    
cufflinks 1.89471 0.0 5.91759    

0 Strain