Gene : Eucgr.B00112 E. grandis v2.0
Defline:  (1 of 5) PTHR12381 - RIBONUCLEOPROTEIN Genomic Order:  36
Name:  ? Eucgr.B00112 Secondary Identifier:  ? PAC:32058786
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.B00112 0.5kb upstream 0.5kb upstream 5737 true Chr02: 538950-544686 Eucalyptus grandis
Eucgr.B00112 0.5kb upstream 0.5kb upstream 500 false Chr02: 538950-539449 Eucalyptus grandis
Eucgr.B00112 0.5kb downstream 0.5kb downstream 5737 true Chr02: 539450-545186 Eucalyptus grandis
Eucgr.B00112 0.5kb downstream 0.5kb downstream 500 false Chr02: 544687-545186 Eucalyptus grandis
Eucgr.B00112 1.0kb upstream 1.0kb upstream 6237 true Chr02: 538450-544686 Eucalyptus grandis
Eucgr.B00112 1.0kb upstream 1.0kb upstream 1000 false Chr02: 538450-539449 Eucalyptus grandis
Eucgr.B00112 1.0kb downstream 1.0kb downstream 6237 true Chr02: 539450-545686 Eucalyptus grandis
Eucgr.B00112 1.0kb downstream 1.0kb downstream 1000 false Chr02: 544687-545686 Eucalyptus grandis
Eucgr.B00112 2.0kb upstream 2.0kb upstream 7237 true Chr02: 537450-544686 Eucalyptus grandis
Eucgr.B00112 2.0kb upstream 2.0kb upstream 2000 false Chr02: 537450-539449 Eucalyptus grandis
Eucgr.B00112 2.0kb downstream 2.0kb downstream 7237 true Chr02: 539450-546686 Eucalyptus grandis
Eucgr.B00112 2.0kb downstream 2.0kb downstream 2000 false Chr02: 544687-546686 Eucalyptus grandis
Eucgr.B00112 5.0kb upstream 5.0kb upstream 10237 true Chr02: 534450-544686 Eucalyptus grandis
Eucgr.B00112 5.0kb upstream 5.0kb upstream 5000 false Chr02: 534450-539449 Eucalyptus grandis
Eucgr.B00112 5.0kb downstream 5.0kb downstream 10237 true Chr02: 539450-549686 Eucalyptus grandis
Eucgr.B00112 5.0kb downstream 5.0kb downstream 5000 false Chr02: 544687-549686 Eucalyptus grandis
Eucgr.B00112 10.0kb upstream 10.0kb upstream 15237 true Chr02: 529450-544686 Eucalyptus grandis
Eucgr.B00112 10.0kb upstream 10.0kb upstream 10000 false Chr02: 529450-539449 Eucalyptus grandis
Eucgr.B00112 10.0kb downstream 10.0kb downstream 15237 true Chr02: 539450-554686 Eucalyptus grandis
Eucgr.B00112 10.0kb downstream 10.0kb downstream 10000 false Chr02: 544687-554686 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124066068 5270 Rosid View MSA
123746630 5271 Pentapetalae View MSA
122792914 5272 Eudicot View MSA
122045612 5273 Angiosperm View MSA
121347246 5274 Embryophyte View MSA
123425668 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 25.9166 0.0 61.4186    
cufflinks 19.9129 0.0 45.9164    
cufflinks 23.0181 0.0 55.806    
cufflinks 21.322 0.0 48.9964    
cufflinks 26.0263 0.0 61.3629    
cufflinks 16.1521 0.0 37.9125   Low

0 Strain