Gene : Eucgr.B00093 E. grandis v2.0
Defline:  (1 of 4) PTHR12300//PTHR12300:SF58 - HVA22-LIKE PROTEINS Genomic Order:  18
Name:  ? Eucgr.B00093 Secondary Identifier:  ? PAC:32058356
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.B00093 0.5kb upstream 0.5kb upstream 1654 true Chr02: 336882-338535 Eucalyptus grandis
Eucgr.B00093 0.5kb upstream 0.5kb upstream 500 false Chr02: 338036-338535 Eucalyptus grandis
Eucgr.B00093 0.5kb downstream 0.5kb downstream 1654 true Chr02: 336382-338035 Eucalyptus grandis
Eucgr.B00093 0.5kb downstream 0.5kb downstream 500 false Chr02: 336382-336881 Eucalyptus grandis
Eucgr.B00093 1.0kb upstream 1.0kb upstream 2154 true Chr02: 336882-339035 Eucalyptus grandis
Eucgr.B00093 1.0kb upstream 1.0kb upstream 1000 false Chr02: 338036-339035 Eucalyptus grandis
Eucgr.B00093 1.0kb downstream 1.0kb downstream 2154 true Chr02: 335882-338035 Eucalyptus grandis
Eucgr.B00093 1.0kb downstream 1.0kb downstream 1000 false Chr02: 335882-336881 Eucalyptus grandis
Eucgr.B00093 2.0kb upstream 2.0kb upstream 3154 true Chr02: 336882-340035 Eucalyptus grandis
Eucgr.B00093 2.0kb upstream 2.0kb upstream 2000 false Chr02: 338036-340035 Eucalyptus grandis
Eucgr.B00093 2.0kb downstream 2.0kb downstream 3154 true Chr02: 334882-338035 Eucalyptus grandis
Eucgr.B00093 2.0kb downstream 2.0kb downstream 2000 false Chr02: 334882-336881 Eucalyptus grandis
Eucgr.B00093 5.0kb upstream 5.0kb upstream 6154 true Chr02: 336882-343035 Eucalyptus grandis
Eucgr.B00093 5.0kb upstream 5.0kb upstream 5000 false Chr02: 338036-343035 Eucalyptus grandis
Eucgr.B00093 5.0kb downstream 5.0kb downstream 6154 true Chr02: 331882-338035 Eucalyptus grandis
Eucgr.B00093 5.0kb downstream 5.0kb downstream 5000 false Chr02: 331882-336881 Eucalyptus grandis
Eucgr.B00093 10.0kb upstream 10.0kb upstream 11154 true Chr02: 336882-348035 Eucalyptus grandis
Eucgr.B00093 10.0kb upstream 10.0kb upstream 10000 false Chr02: 338036-348035 Eucalyptus grandis
Eucgr.B00093 10.0kb downstream 10.0kb downstream 11154 true Chr02: 326882-338035 Eucalyptus grandis
Eucgr.B00093 10.0kb downstream 10.0kb downstream 10000 false Chr02: 326882-336881 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124062938 5270 Rosid View MSA
123747497 5271 Pentapetalae View MSA
122794612 5272 Eudicot View MSA
122049450 5273 Angiosperm View MSA
121349779 5274 Embryophyte View MSA
123427624 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 178.434 0.0 397.321 High  
cufflinks 382.426 0.0 886.488 High High
cufflinks 105.294 0.0 232.924 High  
cufflinks 258.282 0.0 581.87 High  
cufflinks 49.5805 0.0 111.857 High Low
cufflinks 187.64 0.0 419.132 High  

0 Strain