Gene : Eucgr.B00100 E. grandis v2.0
Defline:  (1 of 3) PTHR31956:SF2 - NON-SPECIFIC PHOSPHOLIPASE C6 Genomic Order:  25
Name:  ? Eucgr.B00100 Secondary Identifier:  ? PAC:32062121
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.B00100 0.5kb upstream 0.5kb upstream 2987 true Chr02: 362702-365688 Eucalyptus grandis
Eucgr.B00100 0.5kb upstream 0.5kb upstream 500 false Chr02: 362702-363201 Eucalyptus grandis
Eucgr.B00100 0.5kb downstream 0.5kb downstream 2987 true Chr02: 363202-366188 Eucalyptus grandis
Eucgr.B00100 0.5kb downstream 0.5kb downstream 500 false Chr02: 365689-366188 Eucalyptus grandis
Eucgr.B00100 1.0kb upstream 1.0kb upstream 3487 true Chr02: 362202-365688 Eucalyptus grandis
Eucgr.B00100 1.0kb upstream 1.0kb upstream 1000 false Chr02: 362202-363201 Eucalyptus grandis
Eucgr.B00100 1.0kb downstream 1.0kb downstream 3487 true Chr02: 363202-366688 Eucalyptus grandis
Eucgr.B00100 1.0kb downstream 1.0kb downstream 1000 false Chr02: 365689-366688 Eucalyptus grandis
Eucgr.B00100 2.0kb upstream 2.0kb upstream 4487 true Chr02: 361202-365688 Eucalyptus grandis
Eucgr.B00100 2.0kb upstream 2.0kb upstream 2000 false Chr02: 361202-363201 Eucalyptus grandis
Eucgr.B00100 2.0kb downstream 2.0kb downstream 4487 true Chr02: 363202-367688 Eucalyptus grandis
Eucgr.B00100 2.0kb downstream 2.0kb downstream 2000 false Chr02: 365689-367688 Eucalyptus grandis
Eucgr.B00100 5.0kb upstream 5.0kb upstream 7487 true Chr02: 358202-365688 Eucalyptus grandis
Eucgr.B00100 5.0kb upstream 5.0kb upstream 5000 false Chr02: 358202-363201 Eucalyptus grandis
Eucgr.B00100 5.0kb downstream 5.0kb downstream 7487 true Chr02: 363202-370688 Eucalyptus grandis
Eucgr.B00100 5.0kb downstream 5.0kb downstream 5000 false Chr02: 365689-370688 Eucalyptus grandis
Eucgr.B00100 10.0kb upstream 10.0kb upstream 12487 true Chr02: 353202-365688 Eucalyptus grandis
Eucgr.B00100 10.0kb upstream 10.0kb upstream 10000 false Chr02: 353202-363201 Eucalyptus grandis
Eucgr.B00100 10.0kb downstream 10.0kb downstream 12487 true Chr02: 363202-375688 Eucalyptus grandis
Eucgr.B00100 10.0kb downstream 10.0kb downstream 10000 false Chr02: 365689-375688 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124067209 5270 Rosid View MSA
123741370 5271 Pentapetalae View MSA
122788110 5272 Eudicot View MSA
122046381 5273 Angiosperm View MSA
121310596 5274 Embryophyte View MSA
123348041 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.48626 0.0 8.81981   Low
cufflinks 5.32171 0.0 12.8593    
cufflinks 4.79529 0.0 11.7743    
cufflinks 14.0376 0.0 31.5921   High
cufflinks 7.65265 0.0 17.897    
cufflinks 5.11414 0.0 12.4568    

0 Strain