Gene : Eucgr.B00108 E. grandis v2.0
Defline:  (1 of 6) 2.2.1.6 - Acetolactate synthase / Alpha-acetolactate synthetase Genomic Order:  32
Name:  ? Eucgr.B00108 Secondary Identifier:  ? PAC:32061654
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis BRANCHED-CHAIN-AA-SYN-PWY Eucalyptus grandis pathologic  
Egrandis ILEUSYN-PWY Eucalyptus grandis pathologic  
Egrandis PWY-3001 Eucalyptus grandis pathologic  
Egrandis VALSYN-PWY Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.B00108 0.5kb upstream 0.5kb upstream 3073 true Chr02: 476862-479934 Eucalyptus grandis
Eucgr.B00108 0.5kb upstream 0.5kb upstream 500 false Chr02: 476862-477361 Eucalyptus grandis
Eucgr.B00108 0.5kb downstream 0.5kb downstream 3073 true Chr02: 477362-480434 Eucalyptus grandis
Eucgr.B00108 0.5kb downstream 0.5kb downstream 500 false Chr02: 479935-480434 Eucalyptus grandis
Eucgr.B00108 1.0kb upstream 1.0kb upstream 3573 true Chr02: 476362-479934 Eucalyptus grandis
Eucgr.B00108 1.0kb upstream 1.0kb upstream 1000 false Chr02: 476362-477361 Eucalyptus grandis
Eucgr.B00108 1.0kb downstream 1.0kb downstream 3573 true Chr02: 477362-480934 Eucalyptus grandis
Eucgr.B00108 1.0kb downstream 1.0kb downstream 1000 false Chr02: 479935-480934 Eucalyptus grandis
Eucgr.B00108 2.0kb upstream 2.0kb upstream 4573 true Chr02: 475362-479934 Eucalyptus grandis
Eucgr.B00108 2.0kb upstream 2.0kb upstream 2000 false Chr02: 475362-477361 Eucalyptus grandis
Eucgr.B00108 2.0kb downstream 2.0kb downstream 4573 true Chr02: 477362-481934 Eucalyptus grandis
Eucgr.B00108 2.0kb downstream 2.0kb downstream 2000 false Chr02: 479935-481934 Eucalyptus grandis
Eucgr.B00108 5.0kb upstream 5.0kb upstream 7573 true Chr02: 472362-479934 Eucalyptus grandis
Eucgr.B00108 5.0kb upstream 5.0kb upstream 5000 false Chr02: 472362-477361 Eucalyptus grandis
Eucgr.B00108 5.0kb downstream 5.0kb downstream 7573 true Chr02: 477362-484934 Eucalyptus grandis
Eucgr.B00108 5.0kb downstream 5.0kb downstream 5000 false Chr02: 479935-484934 Eucalyptus grandis
Eucgr.B00108 10.0kb upstream 10.0kb upstream 12573 true Chr02: 467362-479934 Eucalyptus grandis
Eucgr.B00108 10.0kb upstream 10.0kb upstream 10000 false Chr02: 467362-477361 Eucalyptus grandis
Eucgr.B00108 10.0kb downstream 10.0kb downstream 12573 true Chr02: 477362-489934 Eucalyptus grandis
Eucgr.B00108 10.0kb downstream 10.0kb downstream 10000 false Chr02: 479935-489934 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124061754 5270 Rosid View MSA
123740157 5271 Pentapetalae View MSA
122787294 5272 Eudicot View MSA
122042643 5273 Angiosperm View MSA
121346996 5274 Embryophyte View MSA
123424213 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 27.0053 0.0 59.8139    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 14.0208 0.0 31.1723    
cufflinks 0.32228 0.0 1.01231 Low Low
cufflinks 0.652679 0.0 1.89605 Low  
cufflinks 14.3738 0.0 31.9522    

0 Strain