Gene : Eucgr.L00050 E. grandis v2.0
Defline:  (1 of 4) PTHR11735:SF14 - TRNA N6-ADENOSINE THREONYLCARBAMOYLTRANSFERASE-RELATED Genomic Order:  202
Name:  ? Eucgr.L00050 Secondary Identifier:  ? PAC:32047617
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY0-1587 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.L00050 0.5kb upstream 0.5kb upstream 1334 true Chr01: 4118139-4119472 Eucalyptus grandis
Eucgr.L00050 0.5kb upstream 0.5kb upstream 500 false Chr01: 4118139-4118638 Eucalyptus grandis
Eucgr.L00050 0.5kb downstream 0.5kb downstream 1334 true Chr01: 4118639-4119972 Eucalyptus grandis
Eucgr.L00050 0.5kb downstream 0.5kb downstream 500 false Chr01: 4119473-4119972 Eucalyptus grandis
Eucgr.L00050 1.0kb upstream 1.0kb upstream 1834 true Chr01: 4117639-4119472 Eucalyptus grandis
Eucgr.L00050 1.0kb upstream 1.0kb upstream 1000 false Chr01: 4117639-4118638 Eucalyptus grandis
Eucgr.L00050 1.0kb downstream 1.0kb downstream 1834 true Chr01: 4118639-4120472 Eucalyptus grandis
Eucgr.L00050 1.0kb downstream 1.0kb downstream 1000 false Chr01: 4119473-4120472 Eucalyptus grandis
Eucgr.L00050 2.0kb upstream 2.0kb upstream 2834 true Chr01: 4116639-4119472 Eucalyptus grandis
Eucgr.L00050 2.0kb upstream 2.0kb upstream 2000 false Chr01: 4116639-4118638 Eucalyptus grandis
Eucgr.L00050 2.0kb downstream 2.0kb downstream 2834 true Chr01: 4118639-4121472 Eucalyptus grandis
Eucgr.L00050 2.0kb downstream 2.0kb downstream 2000 false Chr01: 4119473-4121472 Eucalyptus grandis
Eucgr.L00050 5.0kb upstream 5.0kb upstream 5834 true Chr01: 4113639-4119472 Eucalyptus grandis
Eucgr.L00050 5.0kb upstream 5.0kb upstream 5000 false Chr01: 4113639-4118638 Eucalyptus grandis
Eucgr.L00050 5.0kb downstream 5.0kb downstream 5834 true Chr01: 4118639-4124472 Eucalyptus grandis
Eucgr.L00050 5.0kb downstream 5.0kb downstream 5000 false Chr01: 4119473-4124472 Eucalyptus grandis
Eucgr.L00050 10.0kb upstream 10.0kb upstream 10834 true Chr01: 4108639-4119472 Eucalyptus grandis
Eucgr.L00050 10.0kb upstream 10.0kb upstream 10000 false Chr01: 4108639-4118638 Eucalyptus grandis
Eucgr.L00050 10.0kb downstream 10.0kb downstream 10834 true Chr01: 4118639-4129472 Eucalyptus grandis
Eucgr.L00050 10.0kb downstream 10.0kb downstream 10000 false Chr01: 4119473-4129472 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121792089 5273 Angiosperm View MSA
124073168 5270 Rosid View MSA
123743876 5271 Pentapetalae View MSA
122796342 5272 Eudicot View MSA
121063343 5274 Embryophyte View MSA
123103100 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.15498 0.0 16.3156    
cufflinks 4.67602 0.0 12.6656    
cufflinks 4.94656 0.0 13.4321    
cufflinks 4.00018 0.0 11.0569    
cufflinks 2.58224 0.0 7.45206   Low
cufflinks 13.3523 0.0 33.0299   High

0 Strain