Gene : Eucgr.L00007 E. grandis v2.0
Defline:  (1 of 2) PTHR32295:SF18 - PROTEIN IQ-DOMAIN 14-RELATED Genomic Order:  169
Name:  ? Eucgr.L00007 Secondary Identifier:  ? PAC:32046130
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.L00007 0.5kb upstream 0.5kb upstream 5935 true Chr01: 2951645-2957579 Eucalyptus grandis
Eucgr.L00007 0.5kb upstream 0.5kb upstream 500 false Chr01: 2951645-2952144 Eucalyptus grandis
Eucgr.L00007 0.5kb downstream 0.5kb downstream 5935 true Chr01: 2952145-2958079 Eucalyptus grandis
Eucgr.L00007 0.5kb downstream 0.5kb downstream 500 false Chr01: 2957580-2958079 Eucalyptus grandis
Eucgr.L00007 1.0kb upstream 1.0kb upstream 6435 true Chr01: 2951145-2957579 Eucalyptus grandis
Eucgr.L00007 1.0kb upstream 1.0kb upstream 1000 false Chr01: 2951145-2952144 Eucalyptus grandis
Eucgr.L00007 1.0kb downstream 1.0kb downstream 6435 true Chr01: 2952145-2958579 Eucalyptus grandis
Eucgr.L00007 1.0kb downstream 1.0kb downstream 1000 false Chr01: 2957580-2958579 Eucalyptus grandis
Eucgr.L00007 2.0kb upstream 2.0kb upstream 7435 true Chr01: 2950145-2957579 Eucalyptus grandis
Eucgr.L00007 2.0kb upstream 2.0kb upstream 2000 false Chr01: 2950145-2952144 Eucalyptus grandis
Eucgr.L00007 2.0kb downstream 2.0kb downstream 7435 true Chr01: 2952145-2959579 Eucalyptus grandis
Eucgr.L00007 2.0kb downstream 2.0kb downstream 2000 false Chr01: 2957580-2959579 Eucalyptus grandis
Eucgr.L00007 5.0kb upstream 5.0kb upstream 10435 true Chr01: 2947145-2957579 Eucalyptus grandis
Eucgr.L00007 5.0kb upstream 5.0kb upstream 5000 false Chr01: 2947145-2952144 Eucalyptus grandis
Eucgr.L00007 5.0kb downstream 5.0kb downstream 10435 true Chr01: 2952145-2962579 Eucalyptus grandis
Eucgr.L00007 5.0kb downstream 5.0kb downstream 5000 false Chr01: 2957580-2962579 Eucalyptus grandis
Eucgr.L00007 10.0kb upstream 10.0kb upstream 15435 true Chr01: 2942145-2957579 Eucalyptus grandis
Eucgr.L00007 10.0kb upstream 10.0kb upstream 10000 false Chr01: 2942145-2952144 Eucalyptus grandis
Eucgr.L00007 10.0kb downstream 10.0kb downstream 15435 true Chr01: 2952145-2967579 Eucalyptus grandis
Eucgr.L00007 10.0kb downstream 10.0kb downstream 10000 false Chr01: 2957580-2967579 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124051767 5270 Rosid View MSA
123753520 5271 Pentapetalae View MSA
122793529 5272 Eudicot View MSA
122042070 5273 Angiosperm View MSA
121351537 5274 Embryophyte View MSA
123382213 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 70.6798 0.0 194.798 High  
cufflinks 69.816 0.0 199.197 High  
cufflinks 58.7003 0.0 160.454 High  
cufflinks 56.7248 0.0 158.457 High  
cufflinks 120.165 0.0 338.866 High High
cufflinks 70.1476 0.0 205.162 High  

0 Strain