Gene : Eucgr.L00004 E. grandis v2.0
Genomic Order:  166 Name:  ? Eucgr.L00004
Secondary Identifier:  ? PAC:32046125
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.L00004 0.5kb upstream 0.5kb upstream 6490 true Chr01: 2932124-2938613 Eucalyptus grandis
Eucgr.L00004 0.5kb upstream 0.5kb upstream 500 false Chr01: 2932124-2932623 Eucalyptus grandis
Eucgr.L00004 0.5kb downstream 0.5kb downstream 6490 true Chr01: 2932624-2939113 Eucalyptus grandis
Eucgr.L00004 0.5kb downstream 0.5kb downstream 500 false Chr01: 2938614-2939113 Eucalyptus grandis
Eucgr.L00004 1.0kb upstream 1.0kb upstream 6990 true Chr01: 2931624-2938613 Eucalyptus grandis
Eucgr.L00004 1.0kb upstream 1.0kb upstream 1000 false Chr01: 2931624-2932623 Eucalyptus grandis
Eucgr.L00004 1.0kb downstream 1.0kb downstream 6990 true Chr01: 2932624-2939613 Eucalyptus grandis
Eucgr.L00004 1.0kb downstream 1.0kb downstream 1000 false Chr01: 2938614-2939613 Eucalyptus grandis
Eucgr.L00004 2.0kb upstream 2.0kb upstream 7990 true Chr01: 2930624-2938613 Eucalyptus grandis
Eucgr.L00004 2.0kb upstream 2.0kb upstream 2000 false Chr01: 2930624-2932623 Eucalyptus grandis
Eucgr.L00004 2.0kb downstream 2.0kb downstream 7990 true Chr01: 2932624-2940613 Eucalyptus grandis
Eucgr.L00004 2.0kb downstream 2.0kb downstream 2000 false Chr01: 2938614-2940613 Eucalyptus grandis
Eucgr.L00004 5.0kb upstream 5.0kb upstream 10990 true Chr01: 2927624-2938613 Eucalyptus grandis
Eucgr.L00004 5.0kb upstream 5.0kb upstream 5000 false Chr01: 2927624-2932623 Eucalyptus grandis
Eucgr.L00004 5.0kb downstream 5.0kb downstream 10990 true Chr01: 2932624-2943613 Eucalyptus grandis
Eucgr.L00004 5.0kb downstream 5.0kb downstream 5000 false Chr01: 2938614-2943613 Eucalyptus grandis
Eucgr.L00004 10.0kb upstream 10.0kb upstream 15990 true Chr01: 2922624-2938613 Eucalyptus grandis
Eucgr.L00004 10.0kb upstream 10.0kb upstream 10000 false Chr01: 2922624-2932623 Eucalyptus grandis
Eucgr.L00004 10.0kb downstream 10.0kb downstream 15990 true Chr01: 2932624-2948613 Eucalyptus grandis
Eucgr.L00004 10.0kb downstream 10.0kb downstream 10000 false Chr01: 2938614-2948613 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124064546 5270 Rosid View MSA
123740345 5271 Pentapetalae View MSA
122790196 5272 Eudicot View MSA
122045175 5273 Angiosperm View MSA
121351591 5274 Embryophyte View MSA
123427027 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.12844 0.0 10.2583    
cufflinks 3.06838 0.0 7.79055    
cufflinks 3.68332 0.0 9.21232    
cufflinks 11.8803 0.0 26.7817   High
cufflinks 14.5919 0.0 32.6704   High
cufflinks 4.4554 0.0 11.0735    

0 Strain