Gene : Eucgr.H01852 E. grandis v2.0
Defline:  (1 of 25) KOG1947 - Leucine rich repeat proteins, some proteins contain F-box Genomic Order:  220
Name:  ? Eucgr.H01852 Secondary Identifier:  ? PAC:32045967
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H01852 0.5kb upstream 0.5kb upstream 2484 true Chr01: 4989916-4992399 Eucalyptus grandis
Eucgr.H01852 0.5kb upstream 0.5kb upstream 500 false Chr01: 4989916-4990415 Eucalyptus grandis
Eucgr.H01852 0.5kb downstream 0.5kb downstream 2484 true Chr01: 4990416-4992899 Eucalyptus grandis
Eucgr.H01852 0.5kb downstream 0.5kb downstream 500 false Chr01: 4992400-4992899 Eucalyptus grandis
Eucgr.H01852 1.0kb upstream 1.0kb upstream 2984 true Chr01: 4989416-4992399 Eucalyptus grandis
Eucgr.H01852 1.0kb upstream 1.0kb upstream 1000 false Chr01: 4989416-4990415 Eucalyptus grandis
Eucgr.H01852 1.0kb downstream 1.0kb downstream 2984 true Chr01: 4990416-4993399 Eucalyptus grandis
Eucgr.H01852 1.0kb downstream 1.0kb downstream 1000 false Chr01: 4992400-4993399 Eucalyptus grandis
Eucgr.H01852 2.0kb upstream 2.0kb upstream 3984 true Chr01: 4988416-4992399 Eucalyptus grandis
Eucgr.H01852 2.0kb upstream 2.0kb upstream 2000 false Chr01: 4988416-4990415 Eucalyptus grandis
Eucgr.H01852 2.0kb downstream 2.0kb downstream 3984 true Chr01: 4990416-4994399 Eucalyptus grandis
Eucgr.H01852 2.0kb downstream 2.0kb downstream 2000 false Chr01: 4992400-4994399 Eucalyptus grandis
Eucgr.H01852 5.0kb upstream 5.0kb upstream 6984 true Chr01: 4985416-4992399 Eucalyptus grandis
Eucgr.H01852 5.0kb upstream 5.0kb upstream 5000 false Chr01: 4985416-4990415 Eucalyptus grandis
Eucgr.H01852 5.0kb downstream 5.0kb downstream 6984 true Chr01: 4990416-4997399 Eucalyptus grandis
Eucgr.H01852 5.0kb downstream 5.0kb downstream 5000 false Chr01: 4992400-4997399 Eucalyptus grandis
Eucgr.H01852 10.0kb upstream 10.0kb upstream 11984 true Chr01: 4980416-4992399 Eucalyptus grandis
Eucgr.H01852 10.0kb upstream 10.0kb upstream 10000 false Chr01: 4980416-4990415 Eucalyptus grandis
Eucgr.H01852 10.0kb downstream 10.0kb downstream 11984 true Chr01: 4990416-5002399 Eucalyptus grandis
Eucgr.H01852 10.0kb downstream 10.0kb downstream 10000 false Chr01: 4992400-5002399 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124066290 5270 Rosid View MSA
123750705 5271 Pentapetalae View MSA
122788712 5272 Eudicot View MSA
122042802 5273 Angiosperm View MSA
121310027 5274 Embryophyte View MSA
123347630 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.951715 0.0 2.8754    
cufflinks 1.99243 0.0 5.58668   High
cufflinks 0.345606 0.0 1.20206 Low Low
cufflinks 0.526837 0.0 1.73566    
cufflinks 1.13404 0.0 3.37749    
cufflinks 1.51821 0.0 4.34231    

0 Strain