Gene : Eucgr.B02782 E. grandis v2.0
Defline:  (1 of 5) PF06127 - Protein of unknown function (DUF962) (DUF962) Genomic Order:  910
Name:  ? Eucgr.B02782 Secondary Identifier:  ? PAC:32047781
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.B02782 0.5kb upstream 0.5kb upstream 4267 true Chr01: 20371192-20375458 Eucalyptus grandis
Eucgr.B02782 0.5kb upstream 0.5kb upstream 500 false Chr01: 20371192-20371691 Eucalyptus grandis
Eucgr.B02782 0.5kb downstream 0.5kb downstream 4267 true Chr01: 20371692-20375958 Eucalyptus grandis
Eucgr.B02782 0.5kb downstream 0.5kb downstream 500 false Chr01: 20375459-20375958 Eucalyptus grandis
Eucgr.B02782 1.0kb upstream 1.0kb upstream 4767 true Chr01: 20370692-20375458 Eucalyptus grandis
Eucgr.B02782 1.0kb upstream 1.0kb upstream 1000 false Chr01: 20370692-20371691 Eucalyptus grandis
Eucgr.B02782 1.0kb downstream 1.0kb downstream 4767 true Chr01: 20371692-20376458 Eucalyptus grandis
Eucgr.B02782 1.0kb downstream 1.0kb downstream 1000 false Chr01: 20375459-20376458 Eucalyptus grandis
Eucgr.B02782 2.0kb upstream 2.0kb upstream 5767 true Chr01: 20369692-20375458 Eucalyptus grandis
Eucgr.B02782 2.0kb upstream 2.0kb upstream 2000 false Chr01: 20369692-20371691 Eucalyptus grandis
Eucgr.B02782 2.0kb downstream 2.0kb downstream 5767 true Chr01: 20371692-20377458 Eucalyptus grandis
Eucgr.B02782 2.0kb downstream 2.0kb downstream 2000 false Chr01: 20375459-20377458 Eucalyptus grandis
Eucgr.B02782 5.0kb upstream 5.0kb upstream 8767 true Chr01: 20366692-20375458 Eucalyptus grandis
Eucgr.B02782 5.0kb upstream 5.0kb upstream 5000 false Chr01: 20366692-20371691 Eucalyptus grandis
Eucgr.B02782 5.0kb downstream 5.0kb downstream 8767 true Chr01: 20371692-20380458 Eucalyptus grandis
Eucgr.B02782 5.0kb downstream 5.0kb downstream 5000 false Chr01: 20375459-20380458 Eucalyptus grandis
Eucgr.B02782 10.0kb upstream 10.0kb upstream 13767 true Chr01: 20361692-20375458 Eucalyptus grandis
Eucgr.B02782 10.0kb upstream 10.0kb upstream 10000 false Chr01: 20361692-20371691 Eucalyptus grandis
Eucgr.B02782 10.0kb downstream 10.0kb downstream 13767 true Chr01: 20371692-20385458 Eucalyptus grandis
Eucgr.B02782 10.0kb downstream 10.0kb downstream 10000 false Chr01: 20375459-20385458 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124061549 5270 Rosid View MSA
123745593 5271 Pentapetalae View MSA
122787415 5272 Eudicot View MSA
122044041 5273 Angiosperm View MSA
121350292 5274 Embryophyte View MSA
123424531 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.32402 0.0 22.4777    
cufflinks 10.9538 0.0 25.9627    
cufflinks 5.35102 0.0 13.6648   Low
cufflinks 13.252 0.0 30.9134   High
cufflinks 10.1759 0.0 24.3213    
cufflinks 8.6617 0.0 21.0113    

0 Strain