Gene : Eucgr.B02770 E. grandis v2.0
Defline:  (1 of 3) PTHR22855:SF38 - ACETYL-COENZYME A CARBOXYLASE CARBOXYL TRANSFERASE SUBUNIT ALPHA, CHLOROPLASTIC Genomic Order:  918
Name:  ? Eucgr.B02770 Secondary Identifier:  ? PAC:32046855
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY0-1264 Eucalyptus grandis pathologic  
Egrandis PWY-4381 Eucalyptus grandis pathologic  
Egrandis PWY-5156 Eucalyptus grandis pathologic  
Egrandis PWY-7388 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.B02770 0.5kb upstream 0.5kb upstream 6360 true Chr01: 20601856-20608215 Eucalyptus grandis
Eucgr.B02770 0.5kb upstream 0.5kb upstream 500 false Chr01: 20607716-20608215 Eucalyptus grandis
Eucgr.B02770 0.5kb downstream 0.5kb downstream 6360 true Chr01: 20601356-20607715 Eucalyptus grandis
Eucgr.B02770 0.5kb downstream 0.5kb downstream 500 false Chr01: 20601356-20601855 Eucalyptus grandis
Eucgr.B02770 1.0kb upstream 1.0kb upstream 6860 true Chr01: 20601856-20608715 Eucalyptus grandis
Eucgr.B02770 1.0kb upstream 1.0kb upstream 1000 false Chr01: 20607716-20608715 Eucalyptus grandis
Eucgr.B02770 1.0kb downstream 1.0kb downstream 6860 true Chr01: 20600856-20607715 Eucalyptus grandis
Eucgr.B02770 1.0kb downstream 1.0kb downstream 1000 false Chr01: 20600856-20601855 Eucalyptus grandis
Eucgr.B02770 2.0kb upstream 2.0kb upstream 7860 true Chr01: 20601856-20609715 Eucalyptus grandis
Eucgr.B02770 2.0kb upstream 2.0kb upstream 2000 false Chr01: 20607716-20609715 Eucalyptus grandis
Eucgr.B02770 2.0kb downstream 2.0kb downstream 7860 true Chr01: 20599856-20607715 Eucalyptus grandis
Eucgr.B02770 2.0kb downstream 2.0kb downstream 2000 false Chr01: 20599856-20601855 Eucalyptus grandis
Eucgr.B02770 5.0kb upstream 5.0kb upstream 10860 true Chr01: 20601856-20612715 Eucalyptus grandis
Eucgr.B02770 5.0kb upstream 5.0kb upstream 5000 false Chr01: 20607716-20612715 Eucalyptus grandis
Eucgr.B02770 5.0kb downstream 5.0kb downstream 10860 true Chr01: 20596856-20607715 Eucalyptus grandis
Eucgr.B02770 5.0kb downstream 5.0kb downstream 5000 false Chr01: 20596856-20601855 Eucalyptus grandis
Eucgr.B02770 10.0kb upstream 10.0kb upstream 15860 true Chr01: 20601856-20617715 Eucalyptus grandis
Eucgr.B02770 10.0kb upstream 10.0kb upstream 10000 false Chr01: 20607716-20617715 Eucalyptus grandis
Eucgr.B02770 10.0kb downstream 10.0kb downstream 15860 true Chr01: 20591856-20607715 Eucalyptus grandis
Eucgr.B02770 10.0kb downstream 10.0kb downstream 10000 false Chr01: 20591856-20601855 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124065453 5270 Rosid View MSA
123737036 5271 Pentapetalae View MSA
122792152 5272 Eudicot View MSA
122047100 5273 Angiosperm View MSA
121351185 5274 Embryophyte View MSA
123426636 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.97124 0.0 20.1826    
cufflinks 2.60983 0.0 6.4817   Low
cufflinks 8.88092 0.0 19.956    
cufflinks 4.29515 0.0 10.1395    
cufflinks 4.59853 0.0 10.8367    
cufflinks 16.0758 0.0 35.5864   High

0 Strain