Gene : Eucgr.A02950 E. grandis v2.0
Defline:  (1 of 3) PTHR11404:SF24 - SUPEROXIDE DISMUTASE [FE] 2, CHLOROPLASTIC Genomic Order:  2653
Name:  ? Eucgr.A02950 Secondary Identifier:  ? PAC:32047432
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis DETOX1-PWY Eucalyptus grandis pathologic  
Egrandis DETOX1-PWY-1 Eucalyptus grandis pathologic  
Egrandis PWY-6854 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.A02950 0.5kb upstream 0.5kb upstream 4196 true Chr01: 44560975-44565170 Eucalyptus grandis
Eucgr.A02950 0.5kb upstream 0.5kb upstream 500 false Chr01: 44560975-44561474 Eucalyptus grandis
Eucgr.A02950 0.5kb downstream 0.5kb downstream 4196 true Chr01: 44561475-44565670 Eucalyptus grandis
Eucgr.A02950 0.5kb downstream 0.5kb downstream 500 false Chr01: 44565171-44565670 Eucalyptus grandis
Eucgr.A02950 1.0kb upstream 1.0kb upstream 4696 true Chr01: 44560475-44565170 Eucalyptus grandis
Eucgr.A02950 1.0kb upstream 1.0kb upstream 1000 false Chr01: 44560475-44561474 Eucalyptus grandis
Eucgr.A02950 1.0kb downstream 1.0kb downstream 4696 true Chr01: 44561475-44566170 Eucalyptus grandis
Eucgr.A02950 1.0kb downstream 1.0kb downstream 1000 false Chr01: 44565171-44566170 Eucalyptus grandis
Eucgr.A02950 2.0kb upstream 2.0kb upstream 5696 true Chr01: 44559475-44565170 Eucalyptus grandis
Eucgr.A02950 2.0kb upstream 2.0kb upstream 2000 false Chr01: 44559475-44561474 Eucalyptus grandis
Eucgr.A02950 2.0kb downstream 2.0kb downstream 5696 true Chr01: 44561475-44567170 Eucalyptus grandis
Eucgr.A02950 2.0kb downstream 2.0kb downstream 2000 false Chr01: 44565171-44567170 Eucalyptus grandis
Eucgr.A02950 5.0kb upstream 5.0kb upstream 8696 true Chr01: 44556475-44565170 Eucalyptus grandis
Eucgr.A02950 5.0kb upstream 5.0kb upstream 5000 false Chr01: 44556475-44561474 Eucalyptus grandis
Eucgr.A02950 5.0kb downstream 5.0kb downstream 8696 true Chr01: 44561475-44570170 Eucalyptus grandis
Eucgr.A02950 5.0kb downstream 5.0kb downstream 5000 false Chr01: 44565171-44570170 Eucalyptus grandis
Eucgr.A02950 10.0kb upstream 10.0kb upstream 13696 true Chr01: 44551475-44565170 Eucalyptus grandis
Eucgr.A02950 10.0kb upstream 10.0kb upstream 10000 false Chr01: 44551475-44561474 Eucalyptus grandis
Eucgr.A02950 10.0kb downstream 10.0kb downstream 13696 true Chr01: 44561475-44575170 Eucalyptus grandis
Eucgr.A02950 10.0kb downstream 10.0kb downstream 10000 false Chr01: 44565171-44575170 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124072391 5270 Rosid View MSA
123741409 5271 Pentapetalae View MSA
122787652 5272 Eudicot View MSA
122047747 5273 Angiosperm View MSA
121351401 5274 Embryophyte View MSA
123425969 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.58346 0.0 77.6083   High
cufflinks 0.478581 0.0 6.81818 Low Low
cufflinks 1.60567 0.0 13.4413    
cufflinks 0.438846 0.0 6.25628   Low
cufflinks 0.989822 0.0 11.002    
cufflinks 2.11024 0.0 15.3608    

0 Strain