Gene : Eucgr.B00602 E. grandis v2.0
Defline:  (1 of 3) PTHR23344//PTHR23344:SF19 - GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE Genomic Order:  471
Name:  ? Eucgr.B00602 Secondary Identifier:  ? PAC:32060255
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-7409 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.B00602 0.5kb upstream 0.5kb upstream 5145 true Chr02: 6098537-6103681 Eucalyptus grandis
Eucgr.B00602 0.5kb upstream 0.5kb upstream 500 false Chr02: 6103182-6103681 Eucalyptus grandis
Eucgr.B00602 0.5kb downstream 0.5kb downstream 5145 true Chr02: 6098037-6103181 Eucalyptus grandis
Eucgr.B00602 0.5kb downstream 0.5kb downstream 500 false Chr02: 6098037-6098536 Eucalyptus grandis
Eucgr.B00602 1.0kb upstream 1.0kb upstream 5645 true Chr02: 6098537-6104181 Eucalyptus grandis
Eucgr.B00602 1.0kb upstream 1.0kb upstream 1000 false Chr02: 6103182-6104181 Eucalyptus grandis
Eucgr.B00602 1.0kb downstream 1.0kb downstream 5645 true Chr02: 6097537-6103181 Eucalyptus grandis
Eucgr.B00602 1.0kb downstream 1.0kb downstream 1000 false Chr02: 6097537-6098536 Eucalyptus grandis
Eucgr.B00602 2.0kb upstream 2.0kb upstream 6645 true Chr02: 6098537-6105181 Eucalyptus grandis
Eucgr.B00602 2.0kb upstream 2.0kb upstream 2000 false Chr02: 6103182-6105181 Eucalyptus grandis
Eucgr.B00602 2.0kb downstream 2.0kb downstream 6645 true Chr02: 6096537-6103181 Eucalyptus grandis
Eucgr.B00602 2.0kb downstream 2.0kb downstream 2000 false Chr02: 6096537-6098536 Eucalyptus grandis
Eucgr.B00602 5.0kb upstream 5.0kb upstream 9645 true Chr02: 6098537-6108181 Eucalyptus grandis
Eucgr.B00602 5.0kb upstream 5.0kb upstream 5000 false Chr02: 6103182-6108181 Eucalyptus grandis
Eucgr.B00602 5.0kb downstream 5.0kb downstream 9645 true Chr02: 6093537-6103181 Eucalyptus grandis
Eucgr.B00602 5.0kb downstream 5.0kb downstream 5000 false Chr02: 6093537-6098536 Eucalyptus grandis
Eucgr.B00602 10.0kb upstream 10.0kb upstream 14645 true Chr02: 6098537-6113181 Eucalyptus grandis
Eucgr.B00602 10.0kb upstream 10.0kb upstream 10000 false Chr02: 6103182-6113181 Eucalyptus grandis
Eucgr.B00602 10.0kb downstream 10.0kb downstream 14645 true Chr02: 6088537-6103181 Eucalyptus grandis
Eucgr.B00602 10.0kb downstream 10.0kb downstream 10000 false Chr02: 6088537-6098536 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124061908 5270 Rosid View MSA
123737505 5271 Pentapetalae View MSA
122790009 5272 Eudicot View MSA
122046255 5273 Angiosperm View MSA
121345517 5274 Embryophyte View MSA
123425927 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.3821 0.0 32.2741   High
cufflinks 4.09341 0.0 10.12    
cufflinks 11.6608 0.0 26.4032    
cufflinks 3.6934 0.0 9.19723    
cufflinks 2.21082 0.0 5.82388   Low
cufflinks 8.82864 0.0 20.4874    

0 Strain