Gene : Eucgr.B00542 E. grandis v2.0
Defline:  (1 of 1) PTHR23327:SF9 - ZINC FINGER (C3HC4-TYPE RING FINGER) FAMILY PROTEIN Genomic Order:  418
Name:  ? Eucgr.B00542 Secondary Identifier:  ? PAC:32058678
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.B00542 0.5kb upstream 0.5kb upstream 11536 true Chr02: 5583124-5594659 Eucalyptus grandis
Eucgr.B00542 0.5kb upstream 0.5kb upstream 500 false Chr02: 5583124-5583623 Eucalyptus grandis
Eucgr.B00542 0.5kb downstream 0.5kb downstream 11536 true Chr02: 5583624-5595159 Eucalyptus grandis
Eucgr.B00542 0.5kb downstream 0.5kb downstream 500 false Chr02: 5594660-5595159 Eucalyptus grandis
Eucgr.B00542 1.0kb upstream 1.0kb upstream 12036 true Chr02: 5582624-5594659 Eucalyptus grandis
Eucgr.B00542 1.0kb upstream 1.0kb upstream 1000 false Chr02: 5582624-5583623 Eucalyptus grandis
Eucgr.B00542 1.0kb downstream 1.0kb downstream 12036 true Chr02: 5583624-5595659 Eucalyptus grandis
Eucgr.B00542 1.0kb downstream 1.0kb downstream 1000 false Chr02: 5594660-5595659 Eucalyptus grandis
Eucgr.B00542 2.0kb upstream 2.0kb upstream 13036 true Chr02: 5581624-5594659 Eucalyptus grandis
Eucgr.B00542 2.0kb upstream 2.0kb upstream 2000 false Chr02: 5581624-5583623 Eucalyptus grandis
Eucgr.B00542 2.0kb downstream 2.0kb downstream 13036 true Chr02: 5583624-5596659 Eucalyptus grandis
Eucgr.B00542 2.0kb downstream 2.0kb downstream 2000 false Chr02: 5594660-5596659 Eucalyptus grandis
Eucgr.B00542 5.0kb upstream 5.0kb upstream 16036 true Chr02: 5578624-5594659 Eucalyptus grandis
Eucgr.B00542 5.0kb upstream 5.0kb upstream 5000 false Chr02: 5578624-5583623 Eucalyptus grandis
Eucgr.B00542 5.0kb downstream 5.0kb downstream 16036 true Chr02: 5583624-5599659 Eucalyptus grandis
Eucgr.B00542 5.0kb downstream 5.0kb downstream 5000 false Chr02: 5594660-5599659 Eucalyptus grandis
Eucgr.B00542 10.0kb upstream 10.0kb upstream 21036 true Chr02: 5573624-5594659 Eucalyptus grandis
Eucgr.B00542 10.0kb upstream 10.0kb upstream 10000 false Chr02: 5573624-5583623 Eucalyptus grandis
Eucgr.B00542 10.0kb downstream 10.0kb downstream 21036 true Chr02: 5583624-5604659 Eucalyptus grandis
Eucgr.B00542 10.0kb downstream 10.0kb downstream 10000 false Chr02: 5594660-5604659 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124060590 5270 Rosid View MSA
123742205 5271 Pentapetalae View MSA
122791083 5272 Eudicot View MSA
122048007 5273 Angiosperm View MSA
121347127 5274 Embryophyte View MSA
123427898 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 42.7602 0.0 106.823 High  
cufflinks 30.5974 0.0 75.2535    
cufflinks 23.3914 0.0 59.9416    
cufflinks 27.0224 0.0 65.6339    
cufflinks 104.498 0.0 273.219 High High
cufflinks 14.103 0.0 35.1421   Low

0 Strain