Gene : Eucgr.B00523 E. grandis v2.0
Defline:  (1 of 1) PTHR21649:SF17 - CHLOROPHYLL A-B BINDING PROTEIN 4, CHLOROPLASTIC Genomic Order:  400
Name:  ? Eucgr.B00523 Secondary Identifier:  ? PAC:32061789
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.B00523 0.5kb upstream 0.5kb upstream 2192 true Chr02: 5414990-5417181 Eucalyptus grandis
Eucgr.B00523 0.5kb upstream 0.5kb upstream 500 false Chr02: 5416682-5417181 Eucalyptus grandis
Eucgr.B00523 0.5kb downstream 0.5kb downstream 2192 true Chr02: 5414490-5416681 Eucalyptus grandis
Eucgr.B00523 0.5kb downstream 0.5kb downstream 500 false Chr02: 5414490-5414989 Eucalyptus grandis
Eucgr.B00523 1.0kb upstream 1.0kb upstream 2692 true Chr02: 5414990-5417681 Eucalyptus grandis
Eucgr.B00523 1.0kb upstream 1.0kb upstream 1000 false Chr02: 5416682-5417681 Eucalyptus grandis
Eucgr.B00523 1.0kb downstream 1.0kb downstream 2692 true Chr02: 5413990-5416681 Eucalyptus grandis
Eucgr.B00523 1.0kb downstream 1.0kb downstream 1000 false Chr02: 5413990-5414989 Eucalyptus grandis
Eucgr.B00523 2.0kb upstream 2.0kb upstream 3692 true Chr02: 5414990-5418681 Eucalyptus grandis
Eucgr.B00523 2.0kb upstream 2.0kb upstream 2000 false Chr02: 5416682-5418681 Eucalyptus grandis
Eucgr.B00523 2.0kb downstream 2.0kb downstream 3692 true Chr02: 5412990-5416681 Eucalyptus grandis
Eucgr.B00523 2.0kb downstream 2.0kb downstream 2000 false Chr02: 5412990-5414989 Eucalyptus grandis
Eucgr.B00523 5.0kb upstream 5.0kb upstream 6692 true Chr02: 5414990-5421681 Eucalyptus grandis
Eucgr.B00523 5.0kb upstream 5.0kb upstream 5000 false Chr02: 5416682-5421681 Eucalyptus grandis
Eucgr.B00523 5.0kb downstream 5.0kb downstream 6692 true Chr02: 5409990-5416681 Eucalyptus grandis
Eucgr.B00523 5.0kb downstream 5.0kb downstream 5000 false Chr02: 5409990-5414989 Eucalyptus grandis
Eucgr.B00523 10.0kb upstream 10.0kb upstream 11692 true Chr02: 5414990-5426681 Eucalyptus grandis
Eucgr.B00523 10.0kb upstream 10.0kb upstream 10000 false Chr02: 5416682-5426681 Eucalyptus grandis
Eucgr.B00523 10.0kb downstream 10.0kb downstream 11692 true Chr02: 5404990-5416681 Eucalyptus grandis
Eucgr.B00523 10.0kb downstream 10.0kb downstream 10000 false Chr02: 5404990-5414989 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124068607 5270 Rosid View MSA
123738583 5271 Pentapetalae View MSA
122789063 5272 Eudicot View MSA
122041547 5273 Angiosperm View MSA
121346524 5274 Embryophyte View MSA
123425939 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 217.611 0.0 524.171 High  
cufflinks 9.75556 0.0 25.2054    
cufflinks 90.6617 0.0 209.248 High  
cufflinks 0.95086 0.0 3.96607   Low
cufflinks 2.47734 0.0 8.32123    
cufflinks 802.217 0.0 2789.7 High High

0 Strain