Gene : Eucgr.B00469 E. grandis v2.0
Defline:  (1 of 1) PTHR12300:SF52 - HVA22-LIKE PROTEIN A-RELATED Genomic Order:  351
Name:  ? Eucgr.B00469 Secondary Identifier:  ? PAC:32060657
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.B00469 0.5kb upstream 0.5kb upstream 3079 true Chr02: 4475943-4479021 Eucalyptus grandis
Eucgr.B00469 0.5kb upstream 0.5kb upstream 500 false Chr02: 4478522-4479021 Eucalyptus grandis
Eucgr.B00469 0.5kb downstream 0.5kb downstream 3079 true Chr02: 4475443-4478521 Eucalyptus grandis
Eucgr.B00469 0.5kb downstream 0.5kb downstream 500 false Chr02: 4475443-4475942 Eucalyptus grandis
Eucgr.B00469 1.0kb upstream 1.0kb upstream 3579 true Chr02: 4475943-4479521 Eucalyptus grandis
Eucgr.B00469 1.0kb upstream 1.0kb upstream 1000 false Chr02: 4478522-4479521 Eucalyptus grandis
Eucgr.B00469 1.0kb downstream 1.0kb downstream 3579 true Chr02: 4474943-4478521 Eucalyptus grandis
Eucgr.B00469 1.0kb downstream 1.0kb downstream 1000 false Chr02: 4474943-4475942 Eucalyptus grandis
Eucgr.B00469 2.0kb upstream 2.0kb upstream 4579 true Chr02: 4475943-4480521 Eucalyptus grandis
Eucgr.B00469 2.0kb upstream 2.0kb upstream 2000 false Chr02: 4478522-4480521 Eucalyptus grandis
Eucgr.B00469 2.0kb downstream 2.0kb downstream 4579 true Chr02: 4473943-4478521 Eucalyptus grandis
Eucgr.B00469 2.0kb downstream 2.0kb downstream 2000 false Chr02: 4473943-4475942 Eucalyptus grandis
Eucgr.B00469 5.0kb upstream 5.0kb upstream 7579 true Chr02: 4475943-4483521 Eucalyptus grandis
Eucgr.B00469 5.0kb upstream 5.0kb upstream 5000 false Chr02: 4478522-4483521 Eucalyptus grandis
Eucgr.B00469 5.0kb downstream 5.0kb downstream 7579 true Chr02: 4470943-4478521 Eucalyptus grandis
Eucgr.B00469 5.0kb downstream 5.0kb downstream 5000 false Chr02: 4470943-4475942 Eucalyptus grandis
Eucgr.B00469 10.0kb upstream 10.0kb upstream 12579 true Chr02: 4475943-4488521 Eucalyptus grandis
Eucgr.B00469 10.0kb upstream 10.0kb upstream 10000 false Chr02: 4478522-4488521 Eucalyptus grandis
Eucgr.B00469 10.0kb downstream 10.0kb downstream 12579 true Chr02: 4465943-4478521 Eucalyptus grandis
Eucgr.B00469 10.0kb downstream 10.0kb downstream 10000 false Chr02: 4465943-4475942 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124065574 5270 Rosid View MSA
123753411 5271 Pentapetalae View MSA
122797924 5272 Eudicot View MSA
122050358 5273 Angiosperm View MSA
121349779 5274 Embryophyte View MSA
123427624 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 29.5206 0.0 77.2427 High  
cufflinks 79.7097 0.0 216.719 High  
cufflinks 32.1129 0.0 86.4351 High  
cufflinks 85.8649 0.0 248.985 High  
cufflinks 101.168 0.0 257.386 High High
cufflinks 22.5755 0.0 57.7741   Low

0 Strain