Gene : Eucgr.B00427 E. grandis v2.0
Defline:  (1 of 9) PTHR10264:SF92 - HYPERSENSITIVE-INDUCED RESPONSE PROTEIN 1 Genomic Order:  314
Name:  ? Eucgr.B00427 Secondary Identifier:  ? PAC:32060397
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.B00427 0.5kb upstream 0.5kb upstream 4504 true Chr02: 4030375-4034878 Eucalyptus grandis
Eucgr.B00427 0.5kb upstream 0.5kb upstream 500 false Chr02: 4030375-4030874 Eucalyptus grandis
Eucgr.B00427 0.5kb downstream 0.5kb downstream 4504 true Chr02: 4030875-4035378 Eucalyptus grandis
Eucgr.B00427 0.5kb downstream 0.5kb downstream 500 false Chr02: 4034879-4035378 Eucalyptus grandis
Eucgr.B00427 1.0kb upstream 1.0kb upstream 5004 true Chr02: 4029875-4034878 Eucalyptus grandis
Eucgr.B00427 1.0kb upstream 1.0kb upstream 1000 false Chr02: 4029875-4030874 Eucalyptus grandis
Eucgr.B00427 1.0kb downstream 1.0kb downstream 5004 true Chr02: 4030875-4035878 Eucalyptus grandis
Eucgr.B00427 1.0kb downstream 1.0kb downstream 1000 false Chr02: 4034879-4035878 Eucalyptus grandis
Eucgr.B00427 2.0kb upstream 2.0kb upstream 6004 true Chr02: 4028875-4034878 Eucalyptus grandis
Eucgr.B00427 2.0kb upstream 2.0kb upstream 2000 false Chr02: 4028875-4030874 Eucalyptus grandis
Eucgr.B00427 2.0kb downstream 2.0kb downstream 6004 true Chr02: 4030875-4036878 Eucalyptus grandis
Eucgr.B00427 2.0kb downstream 2.0kb downstream 2000 false Chr02: 4034879-4036878 Eucalyptus grandis
Eucgr.B00427 5.0kb upstream 5.0kb upstream 9004 true Chr02: 4025875-4034878 Eucalyptus grandis
Eucgr.B00427 5.0kb upstream 5.0kb upstream 5000 false Chr02: 4025875-4030874 Eucalyptus grandis
Eucgr.B00427 5.0kb downstream 5.0kb downstream 9004 true Chr02: 4030875-4039878 Eucalyptus grandis
Eucgr.B00427 5.0kb downstream 5.0kb downstream 5000 false Chr02: 4034879-4039878 Eucalyptus grandis
Eucgr.B00427 10.0kb upstream 10.0kb upstream 14004 true Chr02: 4020875-4034878 Eucalyptus grandis
Eucgr.B00427 10.0kb upstream 10.0kb upstream 10000 false Chr02: 4020875-4030874 Eucalyptus grandis
Eucgr.B00427 10.0kb downstream 10.0kb downstream 14004 true Chr02: 4030875-4044878 Eucalyptus grandis
Eucgr.B00427 10.0kb downstream 10.0kb downstream 10000 false Chr02: 4034879-4044878 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124068988 5270 Rosid View MSA
123744628 5271 Pentapetalae View MSA
122796204 5272 Eudicot View MSA
122042629 5273 Angiosperm View MSA
121344543 5274 Embryophyte View MSA
123427890 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 23.8699 0.0 66.8796   Low
cufflinks 41.4613 0.0 95.0531    
cufflinks 21.8578 0.0 61.036   Low
cufflinks 51.2486 0.0 142.443 High  
cufflinks 47.7913 0.0 118.807 High  
cufflinks 53.325 0.0 142.741 High  

0 Strain