Gene : Eucgr.B00348 E. grandis v2.0
Defline:  (1 of 1) PTHR21183 - RIBOSOMAL PROTEIN L47, MITOCHONDRIAL-RELATED Genomic Order:  244
Name:  ? Eucgr.B00348 Secondary Identifier:  ? PAC:32059049
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.B00348 0.5kb upstream 0.5kb upstream 5911 true Chr02: 3359560-3365470 Eucalyptus grandis
Eucgr.B00348 0.5kb upstream 0.5kb upstream 500 false Chr02: 3359560-3360059 Eucalyptus grandis
Eucgr.B00348 0.5kb downstream 0.5kb downstream 5911 true Chr02: 3360060-3365970 Eucalyptus grandis
Eucgr.B00348 0.5kb downstream 0.5kb downstream 500 false Chr02: 3365471-3365970 Eucalyptus grandis
Eucgr.B00348 1.0kb upstream 1.0kb upstream 6411 true Chr02: 3359060-3365470 Eucalyptus grandis
Eucgr.B00348 1.0kb upstream 1.0kb upstream 1000 false Chr02: 3359060-3360059 Eucalyptus grandis
Eucgr.B00348 1.0kb downstream 1.0kb downstream 6411 true Chr02: 3360060-3366470 Eucalyptus grandis
Eucgr.B00348 1.0kb downstream 1.0kb downstream 1000 false Chr02: 3365471-3366470 Eucalyptus grandis
Eucgr.B00348 2.0kb upstream 2.0kb upstream 7411 true Chr02: 3358060-3365470 Eucalyptus grandis
Eucgr.B00348 2.0kb upstream 2.0kb upstream 2000 false Chr02: 3358060-3360059 Eucalyptus grandis
Eucgr.B00348 2.0kb downstream 2.0kb downstream 7411 true Chr02: 3360060-3367470 Eucalyptus grandis
Eucgr.B00348 2.0kb downstream 2.0kb downstream 2000 false Chr02: 3365471-3367470 Eucalyptus grandis
Eucgr.B00348 5.0kb upstream 5.0kb upstream 10411 true Chr02: 3355060-3365470 Eucalyptus grandis
Eucgr.B00348 5.0kb upstream 5.0kb upstream 5000 false Chr02: 3355060-3360059 Eucalyptus grandis
Eucgr.B00348 5.0kb downstream 5.0kb downstream 10411 true Chr02: 3360060-3370470 Eucalyptus grandis
Eucgr.B00348 5.0kb downstream 5.0kb downstream 5000 false Chr02: 3365471-3370470 Eucalyptus grandis
Eucgr.B00348 10.0kb upstream 10.0kb upstream 15411 true Chr02: 3350060-3365470 Eucalyptus grandis
Eucgr.B00348 10.0kb upstream 10.0kb upstream 10000 false Chr02: 3350060-3360059 Eucalyptus grandis
Eucgr.B00348 10.0kb downstream 10.0kb downstream 15411 true Chr02: 3360060-3375470 Eucalyptus grandis
Eucgr.B00348 10.0kb downstream 10.0kb downstream 10000 false Chr02: 3365471-3375470 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124065847 5270 Rosid View MSA
123748734 5271 Pentapetalae View MSA
122797701 5272 Eudicot View MSA
122044209 5273 Angiosperm View MSA
121343803 5274 Embryophyte View MSA
123425806 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.8634 0.0 38.4264    
cufflinks 18.7842 0.0 43.9466    
cufflinks 11.2595 0.0 27.9631   Low
cufflinks 10.5307 0.0 26.5596   Low
cufflinks 18.6311 0.0 51.4963    
cufflinks 17.6158 0.0 41.5278    

0 Strain