Gene : Eucgr.B00308 E. grandis v2.0
Defline:  (1 of 19) 5.4.99.39 - Beta-amyrin synthase / 2,3-oxidosqualene beta-amyrin cyclase Genomic Order:  210
Name:  ? Eucgr.B00308 Secondary Identifier:  ? PAC:32058248
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-5203 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.B00308 0.5kb upstream 0.5kb upstream 4990 true Chr02: 2989464-2994453 Eucalyptus grandis
Eucgr.B00308 0.5kb upstream 0.5kb upstream 500 false Chr02: 2989464-2989963 Eucalyptus grandis
Eucgr.B00308 0.5kb downstream 0.5kb downstream 4990 true Chr02: 2989964-2994953 Eucalyptus grandis
Eucgr.B00308 0.5kb downstream 0.5kb downstream 500 false Chr02: 2994454-2994953 Eucalyptus grandis
Eucgr.B00308 1.0kb upstream 1.0kb upstream 5490 true Chr02: 2988964-2994453 Eucalyptus grandis
Eucgr.B00308 1.0kb upstream 1.0kb upstream 1000 false Chr02: 2988964-2989963 Eucalyptus grandis
Eucgr.B00308 1.0kb downstream 1.0kb downstream 5490 true Chr02: 2989964-2995453 Eucalyptus grandis
Eucgr.B00308 1.0kb downstream 1.0kb downstream 1000 false Chr02: 2994454-2995453 Eucalyptus grandis
Eucgr.B00308 2.0kb upstream 2.0kb upstream 6490 true Chr02: 2987964-2994453 Eucalyptus grandis
Eucgr.B00308 2.0kb upstream 2.0kb upstream 2000 false Chr02: 2987964-2989963 Eucalyptus grandis
Eucgr.B00308 2.0kb downstream 2.0kb downstream 6490 true Chr02: 2989964-2996453 Eucalyptus grandis
Eucgr.B00308 2.0kb downstream 2.0kb downstream 2000 false Chr02: 2994454-2996453 Eucalyptus grandis
Eucgr.B00308 5.0kb upstream 5.0kb upstream 9490 true Chr02: 2984964-2994453 Eucalyptus grandis
Eucgr.B00308 5.0kb upstream 5.0kb upstream 5000 false Chr02: 2984964-2989963 Eucalyptus grandis
Eucgr.B00308 5.0kb downstream 5.0kb downstream 9490 true Chr02: 2989964-2999453 Eucalyptus grandis
Eucgr.B00308 5.0kb downstream 5.0kb downstream 5000 false Chr02: 2994454-2999453 Eucalyptus grandis
Eucgr.B00308 10.0kb upstream 10.0kb upstream 14490 true Chr02: 2979964-2994453 Eucalyptus grandis
Eucgr.B00308 10.0kb upstream 10.0kb upstream 10000 false Chr02: 2979964-2989963 Eucalyptus grandis
Eucgr.B00308 10.0kb downstream 10.0kb downstream 14490 true Chr02: 2989964-3004453 Eucalyptus grandis
Eucgr.B00308 10.0kb downstream 10.0kb downstream 10000 false Chr02: 2994454-3004453 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121791741 5273 Angiosperm View MSA
124062069 5270 Rosid View MSA
123738080 5271 Pentapetalae View MSA
122788516 5272 Eudicot View MSA
121063041 5274 Embryophyte View MSA
123102827 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.66339 0.0 4.41481    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 5.41508 0.0 12.7695    
cufflinks 9.3844E-4 0.0 0.0236037 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.57444 0.0 4.20821    

0 Strain