Gene : Eucgr.B00318 E. grandis v2.0
Defline:  (1 of 19) 5.4.99.39 - Beta-amyrin synthase / 2,3-oxidosqualene beta-amyrin cyclase Genomic Order:  217
Name:  ? Eucgr.B00318 Secondary Identifier:  ? PAC:32059741
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-5203 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.B00318 0.5kb upstream 0.5kb upstream 7593 true Chr02: 3098311-3105903 Eucalyptus grandis
Eucgr.B00318 0.5kb upstream 0.5kb upstream 500 false Chr02: 3098311-3098810 Eucalyptus grandis
Eucgr.B00318 0.5kb downstream 0.5kb downstream 7593 true Chr02: 3098811-3106403 Eucalyptus grandis
Eucgr.B00318 0.5kb downstream 0.5kb downstream 500 false Chr02: 3105904-3106403 Eucalyptus grandis
Eucgr.B00318 1.0kb upstream 1.0kb upstream 8093 true Chr02: 3097811-3105903 Eucalyptus grandis
Eucgr.B00318 1.0kb upstream 1.0kb upstream 1000 false Chr02: 3097811-3098810 Eucalyptus grandis
Eucgr.B00318 1.0kb downstream 1.0kb downstream 8093 true Chr02: 3098811-3106903 Eucalyptus grandis
Eucgr.B00318 1.0kb downstream 1.0kb downstream 1000 false Chr02: 3105904-3106903 Eucalyptus grandis
Eucgr.B00318 2.0kb upstream 2.0kb upstream 9093 true Chr02: 3096811-3105903 Eucalyptus grandis
Eucgr.B00318 2.0kb upstream 2.0kb upstream 2000 false Chr02: 3096811-3098810 Eucalyptus grandis
Eucgr.B00318 2.0kb downstream 2.0kb downstream 9093 true Chr02: 3098811-3107903 Eucalyptus grandis
Eucgr.B00318 2.0kb downstream 2.0kb downstream 2000 false Chr02: 3105904-3107903 Eucalyptus grandis
Eucgr.B00318 5.0kb upstream 5.0kb upstream 12093 true Chr02: 3093811-3105903 Eucalyptus grandis
Eucgr.B00318 5.0kb upstream 5.0kb upstream 5000 false Chr02: 3093811-3098810 Eucalyptus grandis
Eucgr.B00318 5.0kb downstream 5.0kb downstream 12093 true Chr02: 3098811-3110903 Eucalyptus grandis
Eucgr.B00318 5.0kb downstream 5.0kb downstream 5000 false Chr02: 3105904-3110903 Eucalyptus grandis
Eucgr.B00318 10.0kb upstream 10.0kb upstream 17093 true Chr02: 3088811-3105903 Eucalyptus grandis
Eucgr.B00318 10.0kb upstream 10.0kb upstream 10000 false Chr02: 3088811-3098810 Eucalyptus grandis
Eucgr.B00318 10.0kb downstream 10.0kb downstream 17093 true Chr02: 3098811-3115903 Eucalyptus grandis
Eucgr.B00318 10.0kb downstream 10.0kb downstream 10000 false Chr02: 3105904-3115903 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121791741 5273 Angiosperm View MSA
124062069 5270 Rosid View MSA
123738080 5271 Pentapetalae View MSA
122788516 5272 Eudicot View MSA
121063041 5274 Embryophyte View MSA
123102827 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.568609 0.0 1.65211   Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 2.80733 0.0 6.93245    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.55806 0.0 4.09166    

0 Strain