Gene : Eucgr.B00283 E. grandis v2.0
Defline:  (1 of 2) PTHR10168:SF73 - GLUTAREDOXIN-C1 Genomic Order:  188
Name:  ? Eucgr.B00283 Secondary Identifier:  ? PAC:32059803
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis THIOREDOX-PWY Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.B00283 0.5kb upstream 0.5kb upstream 3142 true Chr02: 2727183-2730324 Eucalyptus grandis
Eucgr.B00283 0.5kb upstream 0.5kb upstream 500 false Chr02: 2727183-2727682 Eucalyptus grandis
Eucgr.B00283 0.5kb downstream 0.5kb downstream 3142 true Chr02: 2727683-2730824 Eucalyptus grandis
Eucgr.B00283 0.5kb downstream 0.5kb downstream 500 false Chr02: 2730325-2730824 Eucalyptus grandis
Eucgr.B00283 1.0kb upstream 1.0kb upstream 3642 true Chr02: 2726683-2730324 Eucalyptus grandis
Eucgr.B00283 1.0kb upstream 1.0kb upstream 1000 false Chr02: 2726683-2727682 Eucalyptus grandis
Eucgr.B00283 1.0kb downstream 1.0kb downstream 3642 true Chr02: 2727683-2731324 Eucalyptus grandis
Eucgr.B00283 1.0kb downstream 1.0kb downstream 1000 false Chr02: 2730325-2731324 Eucalyptus grandis
Eucgr.B00283 2.0kb upstream 2.0kb upstream 4642 true Chr02: 2725683-2730324 Eucalyptus grandis
Eucgr.B00283 2.0kb upstream 2.0kb upstream 2000 false Chr02: 2725683-2727682 Eucalyptus grandis
Eucgr.B00283 2.0kb downstream 2.0kb downstream 4642 true Chr02: 2727683-2732324 Eucalyptus grandis
Eucgr.B00283 2.0kb downstream 2.0kb downstream 2000 false Chr02: 2730325-2732324 Eucalyptus grandis
Eucgr.B00283 5.0kb upstream 5.0kb upstream 7642 true Chr02: 2722683-2730324 Eucalyptus grandis
Eucgr.B00283 5.0kb upstream 5.0kb upstream 5000 false Chr02: 2722683-2727682 Eucalyptus grandis
Eucgr.B00283 5.0kb downstream 5.0kb downstream 7642 true Chr02: 2727683-2735324 Eucalyptus grandis
Eucgr.B00283 5.0kb downstream 5.0kb downstream 5000 false Chr02: 2730325-2735324 Eucalyptus grandis
Eucgr.B00283 10.0kb upstream 10.0kb upstream 12642 true Chr02: 2717683-2730324 Eucalyptus grandis
Eucgr.B00283 10.0kb upstream 10.0kb upstream 10000 false Chr02: 2717683-2727682 Eucalyptus grandis
Eucgr.B00283 10.0kb downstream 10.0kb downstream 12642 true Chr02: 2727683-2740324 Eucalyptus grandis
Eucgr.B00283 10.0kb downstream 10.0kb downstream 10000 false Chr02: 2730325-2740324 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124060631 5270 Rosid View MSA
123740735 5271 Pentapetalae View MSA
122795168 5272 Eudicot View MSA
122042909 5273 Angiosperm View MSA
121349337 5274 Embryophyte View MSA
123428660 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.2323 0.0 23.902    
cufflinks 19.6504 0.0 43.9443    
cufflinks 8.94369 0.0 21.1063    
cufflinks 27.7123 0.0 61.3883   High
cufflinks 14.7661 0.0 33.51    
cufflinks 10.0081 0.0 23.4831    

0 Strain