Gene : Eucgr.B01022 E. grandis v2.0
Defline:  (1 of 5) PTHR33428:SF1 - CHLOROPHYLLASE-2, CHLOROPLASTIC Genomic Order:  805
Name:  ? Eucgr.B01022 Secondary Identifier:  ? PAC:32062020
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-5098 Eucalyptus grandis pathologic  
Egrandis PWY-6927 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.B01022 0.5kb upstream 0.5kb upstream 4164 true Chr02: 14143887-14148050 Eucalyptus grandis
Eucgr.B01022 0.5kb upstream 0.5kb upstream 500 false Chr02: 14147551-14148050 Eucalyptus grandis
Eucgr.B01022 0.5kb downstream 0.5kb downstream 4164 true Chr02: 14143387-14147550 Eucalyptus grandis
Eucgr.B01022 0.5kb downstream 0.5kb downstream 500 false Chr02: 14143387-14143886 Eucalyptus grandis
Eucgr.B01022 1.0kb upstream 1.0kb upstream 4664 true Chr02: 14143887-14148550 Eucalyptus grandis
Eucgr.B01022 1.0kb upstream 1.0kb upstream 1000 false Chr02: 14147551-14148550 Eucalyptus grandis
Eucgr.B01022 1.0kb downstream 1.0kb downstream 4664 true Chr02: 14142887-14147550 Eucalyptus grandis
Eucgr.B01022 1.0kb downstream 1.0kb downstream 1000 false Chr02: 14142887-14143886 Eucalyptus grandis
Eucgr.B01022 2.0kb upstream 2.0kb upstream 5664 true Chr02: 14143887-14149550 Eucalyptus grandis
Eucgr.B01022 2.0kb upstream 2.0kb upstream 2000 false Chr02: 14147551-14149550 Eucalyptus grandis
Eucgr.B01022 2.0kb downstream 2.0kb downstream 5664 true Chr02: 14141887-14147550 Eucalyptus grandis
Eucgr.B01022 2.0kb downstream 2.0kb downstream 2000 false Chr02: 14141887-14143886 Eucalyptus grandis
Eucgr.B01022 5.0kb upstream 5.0kb upstream 8664 true Chr02: 14143887-14152550 Eucalyptus grandis
Eucgr.B01022 5.0kb upstream 5.0kb upstream 5000 false Chr02: 14147551-14152550 Eucalyptus grandis
Eucgr.B01022 5.0kb downstream 5.0kb downstream 8664 true Chr02: 14138887-14147550 Eucalyptus grandis
Eucgr.B01022 5.0kb downstream 5.0kb downstream 5000 false Chr02: 14138887-14143886 Eucalyptus grandis
Eucgr.B01022 10.0kb upstream 10.0kb upstream 13664 true Chr02: 14143887-14157550 Eucalyptus grandis
Eucgr.B01022 10.0kb upstream 10.0kb upstream 10000 false Chr02: 14147551-14157550 Eucalyptus grandis
Eucgr.B01022 10.0kb downstream 10.0kb downstream 13664 true Chr02: 14133887-14147550 Eucalyptus grandis
Eucgr.B01022 10.0kb downstream 10.0kb downstream 10000 false Chr02: 14133887-14143886 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124065690 5270 Rosid View MSA
123737382 5271 Pentapetalae View MSA
122788570 5272 Eudicot View MSA
122043389 5273 Angiosperm View MSA
121344751 5274 Embryophyte View MSA
123428003 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.73599 0.0 4.87283    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.178605 0.0 0.668226 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 2.60318 0.0 6.99622    

0 Strain