Gene : Eucgr.B01021 E. grandis v2.0
Defline:  (1 of 5) PTHR33428:SF1 - CHLOROPHYLLASE-2, CHLOROPLASTIC Genomic Order:  804
Name:  ? Eucgr.B01021 Secondary Identifier:  ? PAC:32060784
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-5098 Eucalyptus grandis pathologic  
Egrandis PWY-6927 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.B01021 0.5kb upstream 0.5kb upstream 3858 true Chr02: 14134003-14137860 Eucalyptus grandis
Eucgr.B01021 0.5kb upstream 0.5kb upstream 500 false Chr02: 14137361-14137860 Eucalyptus grandis
Eucgr.B01021 0.5kb downstream 0.5kb downstream 3858 true Chr02: 14133503-14137360 Eucalyptus grandis
Eucgr.B01021 0.5kb downstream 0.5kb downstream 500 false Chr02: 14133503-14134002 Eucalyptus grandis
Eucgr.B01021 1.0kb upstream 1.0kb upstream 4358 true Chr02: 14134003-14138360 Eucalyptus grandis
Eucgr.B01021 1.0kb upstream 1.0kb upstream 1000 false Chr02: 14137361-14138360 Eucalyptus grandis
Eucgr.B01021 1.0kb downstream 1.0kb downstream 4358 true Chr02: 14133003-14137360 Eucalyptus grandis
Eucgr.B01021 1.0kb downstream 1.0kb downstream 1000 false Chr02: 14133003-14134002 Eucalyptus grandis
Eucgr.B01021 2.0kb upstream 2.0kb upstream 5358 true Chr02: 14134003-14139360 Eucalyptus grandis
Eucgr.B01021 2.0kb upstream 2.0kb upstream 2000 false Chr02: 14137361-14139360 Eucalyptus grandis
Eucgr.B01021 2.0kb downstream 2.0kb downstream 5358 true Chr02: 14132003-14137360 Eucalyptus grandis
Eucgr.B01021 2.0kb downstream 2.0kb downstream 2000 false Chr02: 14132003-14134002 Eucalyptus grandis
Eucgr.B01021 5.0kb upstream 5.0kb upstream 8358 true Chr02: 14134003-14142360 Eucalyptus grandis
Eucgr.B01021 5.0kb upstream 5.0kb upstream 5000 false Chr02: 14137361-14142360 Eucalyptus grandis
Eucgr.B01021 5.0kb downstream 5.0kb downstream 8358 true Chr02: 14129003-14137360 Eucalyptus grandis
Eucgr.B01021 5.0kb downstream 5.0kb downstream 5000 false Chr02: 14129003-14134002 Eucalyptus grandis
Eucgr.B01021 10.0kb upstream 10.0kb upstream 13358 true Chr02: 14134003-14147360 Eucalyptus grandis
Eucgr.B01021 10.0kb upstream 10.0kb upstream 10000 false Chr02: 14137361-14147360 Eucalyptus grandis
Eucgr.B01021 10.0kb downstream 10.0kb downstream 13358 true Chr02: 14124003-14137360 Eucalyptus grandis
Eucgr.B01021 10.0kb downstream 10.0kb downstream 10000 false Chr02: 14124003-14134002 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124065690 5270 Rosid View MSA
123737382 5271 Pentapetalae View MSA
122788570 5272 Eudicot View MSA
122043389 5273 Angiosperm View MSA
121344751 5274 Embryophyte View MSA
123428003 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.2499 0.0 39.8914    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 6.88384 0.0 17.5104    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain