Gene : Eucgr.B01017 E. grandis v2.0
Defline:  (1 of 4) 1.13.11.53 - Acireductone dioxygenase (Ni(2+)-requiring) / E-2 Genomic Order:  800
Name:  ? Eucgr.B01017 Secondary Identifier:  ? PAC:32060831
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-4361 Eucalyptus grandis pathologic  
Egrandis PWY-5389 Eucalyptus grandis pathologic  
Egrandis PWY-7270 Eucalyptus grandis pathologic  
Egrandis PWY-7528 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.B01017 0.5kb upstream 0.5kb upstream 3783 true Chr02: 14082968-14086750 Eucalyptus grandis
Eucgr.B01017 0.5kb upstream 0.5kb upstream 500 false Chr02: 14086251-14086750 Eucalyptus grandis
Eucgr.B01017 0.5kb downstream 0.5kb downstream 3783 true Chr02: 14082468-14086250 Eucalyptus grandis
Eucgr.B01017 0.5kb downstream 0.5kb downstream 500 false Chr02: 14082468-14082967 Eucalyptus grandis
Eucgr.B01017 1.0kb upstream 1.0kb upstream 4283 true Chr02: 14082968-14087250 Eucalyptus grandis
Eucgr.B01017 1.0kb upstream 1.0kb upstream 1000 false Chr02: 14086251-14087250 Eucalyptus grandis
Eucgr.B01017 1.0kb downstream 1.0kb downstream 4283 true Chr02: 14081968-14086250 Eucalyptus grandis
Eucgr.B01017 1.0kb downstream 1.0kb downstream 1000 false Chr02: 14081968-14082967 Eucalyptus grandis
Eucgr.B01017 2.0kb upstream 2.0kb upstream 5283 true Chr02: 14082968-14088250 Eucalyptus grandis
Eucgr.B01017 2.0kb upstream 2.0kb upstream 2000 false Chr02: 14086251-14088250 Eucalyptus grandis
Eucgr.B01017 2.0kb downstream 2.0kb downstream 5283 true Chr02: 14080968-14086250 Eucalyptus grandis
Eucgr.B01017 2.0kb downstream 2.0kb downstream 2000 false Chr02: 14080968-14082967 Eucalyptus grandis
Eucgr.B01017 5.0kb upstream 5.0kb upstream 8283 true Chr02: 14082968-14091250 Eucalyptus grandis
Eucgr.B01017 5.0kb upstream 5.0kb upstream 5000 false Chr02: 14086251-14091250 Eucalyptus grandis
Eucgr.B01017 5.0kb downstream 5.0kb downstream 8283 true Chr02: 14077968-14086250 Eucalyptus grandis
Eucgr.B01017 5.0kb downstream 5.0kb downstream 5000 false Chr02: 14077968-14082967 Eucalyptus grandis
Eucgr.B01017 10.0kb upstream 10.0kb upstream 13283 true Chr02: 14082968-14096250 Eucalyptus grandis
Eucgr.B01017 10.0kb upstream 10.0kb upstream 10000 false Chr02: 14086251-14096250 Eucalyptus grandis
Eucgr.B01017 10.0kb downstream 10.0kb downstream 13283 true Chr02: 14072968-14086250 Eucalyptus grandis
Eucgr.B01017 10.0kb downstream 10.0kb downstream 10000 false Chr02: 14072968-14082967 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124070123 5270 Rosid View MSA
123741202 5271 Pentapetalae View MSA
122793339 5272 Eudicot View MSA
122046510 5273 Angiosperm View MSA
121343851 5274 Embryophyte View MSA
123424670 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 26.3596 0.0 66.3033    
cufflinks 50.7342 0.0 122.59 High High
cufflinks 22.0954 0.0 61.8547   Low
cufflinks 44.6381 0.0 116.52 High  
cufflinks 40.0592 0.0 100.595 High  
cufflinks 22.5215 0.0 61.0434   Low

0 Strain