Gene : Eucgr.B01033 E. grandis v2.0
Defline:  (1 of 100) PTHR23155//PTHR23155:SF563 - LEUCINE-RICH REPEAT-CONTAINING PROTEIN Genomic Order:  814
Name:  ? Eucgr.B01033 Secondary Identifier:  ? PAC:32058385
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.B01033 0.5kb upstream 0.5kb upstream 3794 true Chr02: 14366686-14370479 Eucalyptus grandis
Eucgr.B01033 0.5kb upstream 0.5kb upstream 500 false Chr02: 14369980-14370479 Eucalyptus grandis
Eucgr.B01033 0.5kb downstream 0.5kb downstream 3794 true Chr02: 14366186-14369979 Eucalyptus grandis
Eucgr.B01033 0.5kb downstream 0.5kb downstream 500 false Chr02: 14366186-14366685 Eucalyptus grandis
Eucgr.B01033 1.0kb upstream 1.0kb upstream 4294 true Chr02: 14366686-14370979 Eucalyptus grandis
Eucgr.B01033 1.0kb upstream 1.0kb upstream 1000 false Chr02: 14369980-14370979 Eucalyptus grandis
Eucgr.B01033 1.0kb downstream 1.0kb downstream 4294 true Chr02: 14365686-14369979 Eucalyptus grandis
Eucgr.B01033 1.0kb downstream 1.0kb downstream 1000 false Chr02: 14365686-14366685 Eucalyptus grandis
Eucgr.B01033 2.0kb upstream 2.0kb upstream 5294 true Chr02: 14366686-14371979 Eucalyptus grandis
Eucgr.B01033 2.0kb upstream 2.0kb upstream 2000 false Chr02: 14369980-14371979 Eucalyptus grandis
Eucgr.B01033 2.0kb downstream 2.0kb downstream 5294 true Chr02: 14364686-14369979 Eucalyptus grandis
Eucgr.B01033 2.0kb downstream 2.0kb downstream 2000 false Chr02: 14364686-14366685 Eucalyptus grandis
Eucgr.B01033 5.0kb upstream 5.0kb upstream 8294 true Chr02: 14366686-14374979 Eucalyptus grandis
Eucgr.B01033 5.0kb upstream 5.0kb upstream 5000 false Chr02: 14369980-14374979 Eucalyptus grandis
Eucgr.B01033 5.0kb downstream 5.0kb downstream 8294 true Chr02: 14361686-14369979 Eucalyptus grandis
Eucgr.B01033 5.0kb downstream 5.0kb downstream 5000 false Chr02: 14361686-14366685 Eucalyptus grandis
Eucgr.B01033 10.0kb upstream 10.0kb upstream 13294 true Chr02: 14366686-14379979 Eucalyptus grandis
Eucgr.B01033 10.0kb upstream 10.0kb upstream 10000 false Chr02: 14369980-14379979 Eucalyptus grandis
Eucgr.B01033 10.0kb downstream 10.0kb downstream 13294 true Chr02: 14356686-14369979 Eucalyptus grandis
Eucgr.B01033 10.0kb downstream 10.0kb downstream 10000 false Chr02: 14356686-14366685 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121782904 5273 Angiosperm View MSA
124051611 5270 Rosid View MSA
123754067 5271 Pentapetalae View MSA
122775480 5272 Eudicot View MSA
121054404 5274 Embryophyte View MSA
123094390 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.28025 0.0 3.41841    
cufflinks 2.6659 0.0 6.5493   High
cufflinks 1.45763 0.0 3.82092    
cufflinks 0.494507 0.0 1.43944   Low
cufflinks 0.772782 0.0 2.15866    
cufflinks 2.30169 0.0 5.84248    

0 Strain