Gene : Eucgr.B01011 E. grandis v2.0
Defline:  (1 of 4) 1.13.11.53 - Acireductone dioxygenase (Ni(2+)-requiring) / E-2 Genomic Order:  796
Name:  ? Eucgr.B01011 Secondary Identifier:  ? PAC:32061939
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-4361 Eucalyptus grandis pathologic  
Egrandis PWY-5389 Eucalyptus grandis pathologic  
Egrandis PWY-7270 Eucalyptus grandis pathologic  
Egrandis PWY-7528 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.B01011 0.5kb upstream 0.5kb upstream 3783 true Chr02: 14031935-14035717 Eucalyptus grandis
Eucgr.B01011 0.5kb upstream 0.5kb upstream 500 false Chr02: 14035218-14035717 Eucalyptus grandis
Eucgr.B01011 0.5kb downstream 0.5kb downstream 3783 true Chr02: 14031435-14035217 Eucalyptus grandis
Eucgr.B01011 0.5kb downstream 0.5kb downstream 500 false Chr02: 14031435-14031934 Eucalyptus grandis
Eucgr.B01011 1.0kb upstream 1.0kb upstream 4283 true Chr02: 14031935-14036217 Eucalyptus grandis
Eucgr.B01011 1.0kb upstream 1.0kb upstream 1000 false Chr02: 14035218-14036217 Eucalyptus grandis
Eucgr.B01011 1.0kb downstream 1.0kb downstream 4283 true Chr02: 14030935-14035217 Eucalyptus grandis
Eucgr.B01011 1.0kb downstream 1.0kb downstream 1000 false Chr02: 14030935-14031934 Eucalyptus grandis
Eucgr.B01011 2.0kb upstream 2.0kb upstream 5283 true Chr02: 14031935-14037217 Eucalyptus grandis
Eucgr.B01011 2.0kb upstream 2.0kb upstream 2000 false Chr02: 14035218-14037217 Eucalyptus grandis
Eucgr.B01011 2.0kb downstream 2.0kb downstream 5283 true Chr02: 14029935-14035217 Eucalyptus grandis
Eucgr.B01011 2.0kb downstream 2.0kb downstream 2000 false Chr02: 14029935-14031934 Eucalyptus grandis
Eucgr.B01011 5.0kb upstream 5.0kb upstream 8283 true Chr02: 14031935-14040217 Eucalyptus grandis
Eucgr.B01011 5.0kb upstream 5.0kb upstream 5000 false Chr02: 14035218-14040217 Eucalyptus grandis
Eucgr.B01011 5.0kb downstream 5.0kb downstream 8283 true Chr02: 14026935-14035217 Eucalyptus grandis
Eucgr.B01011 5.0kb downstream 5.0kb downstream 5000 false Chr02: 14026935-14031934 Eucalyptus grandis
Eucgr.B01011 10.0kb upstream 10.0kb upstream 13283 true Chr02: 14031935-14045217 Eucalyptus grandis
Eucgr.B01011 10.0kb upstream 10.0kb upstream 10000 false Chr02: 14035218-14045217 Eucalyptus grandis
Eucgr.B01011 10.0kb downstream 10.0kb downstream 13283 true Chr02: 14021935-14035217 Eucalyptus grandis
Eucgr.B01011 10.0kb downstream 10.0kb downstream 10000 false Chr02: 14021935-14031934 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124070123 5270 Rosid View MSA
123741202 5271 Pentapetalae View MSA
122793339 5272 Eudicot View MSA
122046510 5273 Angiosperm View MSA
121343851 5274 Embryophyte View MSA
123424670 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 58.4373 0.0 131.861 High  
cufflinks 68.1026 0.0 155.496 High  
cufflinks 76.5884 0.0 176.393 High  
cufflinks 176.333 0.0 409.62 High High
cufflinks 78.7467 0.0 181.503 High  
cufflinks 87.9821 0.0 202.584 High  

0 Strain