Gene : Eucgr.B00997 E. grandis v2.0
Defline:  (1 of 2) PTHR11102:SF84 - HCP-like superfamily protein-related Genomic Order:  782
Name:  ? Eucgr.B00997 Secondary Identifier:  ? PAC:32058932
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.B00997 0.5kb upstream 0.5kb upstream 5583 true Chr02: 13869600-13875182 Eucalyptus grandis
Eucgr.B00997 0.5kb upstream 0.5kb upstream 500 false Chr02: 13869600-13870099 Eucalyptus grandis
Eucgr.B00997 0.5kb downstream 0.5kb downstream 5583 true Chr02: 13870100-13875682 Eucalyptus grandis
Eucgr.B00997 0.5kb downstream 0.5kb downstream 500 false Chr02: 13875183-13875682 Eucalyptus grandis
Eucgr.B00997 1.0kb upstream 1.0kb upstream 6083 true Chr02: 13869100-13875182 Eucalyptus grandis
Eucgr.B00997 1.0kb upstream 1.0kb upstream 1000 false Chr02: 13869100-13870099 Eucalyptus grandis
Eucgr.B00997 1.0kb downstream 1.0kb downstream 6083 true Chr02: 13870100-13876182 Eucalyptus grandis
Eucgr.B00997 1.0kb downstream 1.0kb downstream 1000 false Chr02: 13875183-13876182 Eucalyptus grandis
Eucgr.B00997 2.0kb upstream 2.0kb upstream 7083 true Chr02: 13868100-13875182 Eucalyptus grandis
Eucgr.B00997 2.0kb upstream 2.0kb upstream 2000 false Chr02: 13868100-13870099 Eucalyptus grandis
Eucgr.B00997 2.0kb downstream 2.0kb downstream 7083 true Chr02: 13870100-13877182 Eucalyptus grandis
Eucgr.B00997 2.0kb downstream 2.0kb downstream 2000 false Chr02: 13875183-13877182 Eucalyptus grandis
Eucgr.B00997 5.0kb upstream 5.0kb upstream 10083 true Chr02: 13865100-13875182 Eucalyptus grandis
Eucgr.B00997 5.0kb upstream 5.0kb upstream 5000 false Chr02: 13865100-13870099 Eucalyptus grandis
Eucgr.B00997 5.0kb downstream 5.0kb downstream 10083 true Chr02: 13870100-13880182 Eucalyptus grandis
Eucgr.B00997 5.0kb downstream 5.0kb downstream 5000 false Chr02: 13875183-13880182 Eucalyptus grandis
Eucgr.B00997 10.0kb upstream 10.0kb upstream 15083 true Chr02: 13860100-13875182 Eucalyptus grandis
Eucgr.B00997 10.0kb upstream 10.0kb upstream 10000 false Chr02: 13860100-13870099 Eucalyptus grandis
Eucgr.B00997 10.0kb downstream 10.0kb downstream 15083 true Chr02: 13870100-13885182 Eucalyptus grandis
Eucgr.B00997 10.0kb downstream 10.0kb downstream 10000 false Chr02: 13875183-13885182 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124065958 5270 Rosid View MSA
123743984 5271 Pentapetalae View MSA
122786956 5272 Eudicot View MSA
122044163 5273 Angiosperm View MSA
123428907 5275 Viridiplantae View MSA
121346808 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.9866 0.0 37.567    
cufflinks 15.0158 0.0 33.2325    
cufflinks 12.5668 0.0 27.8859   Low
cufflinks 22.6216 0.0 50.1638   High
cufflinks 15.7322 0.0 34.8044    
cufflinks 12.8457 0.0 28.4923    

0 Strain