Gene : Eucgr.B00858 E. grandis v2.0
Defline:  (1 of 1) PTHR11081:SF27 - 5'-3' EXONUCLEASE FAMILY PROTEIN Genomic Order:  665
Name:  ? Eucgr.B00858 Secondary Identifier:  ? PAC:32061386
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.B00858 0.5kb upstream 0.5kb upstream 4559 true Chr02: 8972931-8977489 Eucalyptus grandis
Eucgr.B00858 0.5kb upstream 0.5kb upstream 500 false Chr02: 8972931-8973430 Eucalyptus grandis
Eucgr.B00858 0.5kb downstream 0.5kb downstream 4559 true Chr02: 8973431-8977989 Eucalyptus grandis
Eucgr.B00858 0.5kb downstream 0.5kb downstream 500 false Chr02: 8977490-8977989 Eucalyptus grandis
Eucgr.B00858 1.0kb upstream 1.0kb upstream 5059 true Chr02: 8972431-8977489 Eucalyptus grandis
Eucgr.B00858 1.0kb upstream 1.0kb upstream 1000 false Chr02: 8972431-8973430 Eucalyptus grandis
Eucgr.B00858 1.0kb downstream 1.0kb downstream 5059 true Chr02: 8973431-8978489 Eucalyptus grandis
Eucgr.B00858 1.0kb downstream 1.0kb downstream 1000 false Chr02: 8977490-8978489 Eucalyptus grandis
Eucgr.B00858 2.0kb upstream 2.0kb upstream 6059 true Chr02: 8971431-8977489 Eucalyptus grandis
Eucgr.B00858 2.0kb upstream 2.0kb upstream 2000 false Chr02: 8971431-8973430 Eucalyptus grandis
Eucgr.B00858 2.0kb downstream 2.0kb downstream 6059 true Chr02: 8973431-8979489 Eucalyptus grandis
Eucgr.B00858 2.0kb downstream 2.0kb downstream 2000 false Chr02: 8977490-8979489 Eucalyptus grandis
Eucgr.B00858 5.0kb upstream 5.0kb upstream 9059 true Chr02: 8968431-8977489 Eucalyptus grandis
Eucgr.B00858 5.0kb upstream 5.0kb upstream 5000 false Chr02: 8968431-8973430 Eucalyptus grandis
Eucgr.B00858 5.0kb downstream 5.0kb downstream 9059 true Chr02: 8973431-8982489 Eucalyptus grandis
Eucgr.B00858 5.0kb downstream 5.0kb downstream 5000 false Chr02: 8977490-8982489 Eucalyptus grandis
Eucgr.B00858 10.0kb upstream 10.0kb upstream 14059 true Chr02: 8963431-8977489 Eucalyptus grandis
Eucgr.B00858 10.0kb upstream 10.0kb upstream 10000 false Chr02: 8963431-8973430 Eucalyptus grandis
Eucgr.B00858 10.0kb downstream 10.0kb downstream 14059 true Chr02: 8973431-8987489 Eucalyptus grandis
Eucgr.B00858 10.0kb downstream 10.0kb downstream 10000 false Chr02: 8977490-8987489 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026411 5273 Angiosperm View MSA
124066271 5270 Rosid View MSA
123736682 5271 Pentapetalae View MSA
122787637 5272 Eudicot View MSA
121349640 5274 Embryophyte View MSA
123426218 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.29756 0.0 3.60676   High
cufflinks 0.34207 0.0 1.10128 Low  
cufflinks 0.33519 0.0 1.08456 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.381516 0.0 1.22698 Low  

0 Strain