Gene : Eucgr.B00826 E. grandis v2.0
Defline:  (1 of 4) 4.2.1.113 - o-succinylbenzoate synthase / OSBS Genomic Order:  637
Name:  ? Eucgr.B00826 Secondary Identifier:  ? PAC:32060840
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-5837 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.B00826 0.5kb upstream 0.5kb upstream 8898 true Chr02: 8546334-8555231 Eucalyptus grandis
Eucgr.B00826 0.5kb upstream 0.5kb upstream 500 false Chr02: 8554732-8555231 Eucalyptus grandis
Eucgr.B00826 0.5kb downstream 0.5kb downstream 8898 true Chr02: 8545834-8554731 Eucalyptus grandis
Eucgr.B00826 0.5kb downstream 0.5kb downstream 500 false Chr02: 8545834-8546333 Eucalyptus grandis
Eucgr.B00826 1.0kb upstream 1.0kb upstream 9398 true Chr02: 8546334-8555731 Eucalyptus grandis
Eucgr.B00826 1.0kb upstream 1.0kb upstream 1000 false Chr02: 8554732-8555731 Eucalyptus grandis
Eucgr.B00826 1.0kb downstream 1.0kb downstream 9398 true Chr02: 8545334-8554731 Eucalyptus grandis
Eucgr.B00826 1.0kb downstream 1.0kb downstream 1000 false Chr02: 8545334-8546333 Eucalyptus grandis
Eucgr.B00826 2.0kb upstream 2.0kb upstream 10398 true Chr02: 8546334-8556731 Eucalyptus grandis
Eucgr.B00826 2.0kb upstream 2.0kb upstream 2000 false Chr02: 8554732-8556731 Eucalyptus grandis
Eucgr.B00826 2.0kb downstream 2.0kb downstream 10398 true Chr02: 8544334-8554731 Eucalyptus grandis
Eucgr.B00826 2.0kb downstream 2.0kb downstream 2000 false Chr02: 8544334-8546333 Eucalyptus grandis
Eucgr.B00826 5.0kb upstream 5.0kb upstream 13398 true Chr02: 8546334-8559731 Eucalyptus grandis
Eucgr.B00826 5.0kb upstream 5.0kb upstream 5000 false Chr02: 8554732-8559731 Eucalyptus grandis
Eucgr.B00826 5.0kb downstream 5.0kb downstream 13398 true Chr02: 8541334-8554731 Eucalyptus grandis
Eucgr.B00826 5.0kb downstream 5.0kb downstream 5000 false Chr02: 8541334-8546333 Eucalyptus grandis
Eucgr.B00826 10.0kb upstream 10.0kb upstream 18398 true Chr02: 8546334-8564731 Eucalyptus grandis
Eucgr.B00826 10.0kb upstream 10.0kb upstream 10000 false Chr02: 8554732-8564731 Eucalyptus grandis
Eucgr.B00826 10.0kb downstream 10.0kb downstream 18398 true Chr02: 8536334-8554731 Eucalyptus grandis
Eucgr.B00826 10.0kb downstream 10.0kb downstream 10000 false Chr02: 8536334-8546333 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124068265 5270 Rosid View MSA
123736844 5271 Pentapetalae View MSA
122793811 5272 Eudicot View MSA
122046477 5273 Angiosperm View MSA
121344222 5274 Embryophyte View MSA
123380007 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0202662 0.0 0.179456 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain