Gene : Eucgr.B01553 E. grandis v2.0
Defline:  (1 of 33) PF00190 - Cupin (Cupin_1) Genomic Order:  1118
Name:  ? Eucgr.B01553 Secondary Identifier:  ? PAC:32060056
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.B01553 0.5kb upstream 0.5kb upstream 2590 true Chr02: 22906679-22909268 Eucalyptus grandis
Eucgr.B01553 0.5kb upstream 0.5kb upstream 500 false Chr02: 22906679-22907178 Eucalyptus grandis
Eucgr.B01553 0.5kb downstream 0.5kb downstream 2590 true Chr02: 22907179-22909768 Eucalyptus grandis
Eucgr.B01553 0.5kb downstream 0.5kb downstream 500 false Chr02: 22909269-22909768 Eucalyptus grandis
Eucgr.B01553 1.0kb upstream 1.0kb upstream 3090 true Chr02: 22906179-22909268 Eucalyptus grandis
Eucgr.B01553 1.0kb upstream 1.0kb upstream 1000 false Chr02: 22906179-22907178 Eucalyptus grandis
Eucgr.B01553 1.0kb downstream 1.0kb downstream 3090 true Chr02: 22907179-22910268 Eucalyptus grandis
Eucgr.B01553 1.0kb downstream 1.0kb downstream 1000 false Chr02: 22909269-22910268 Eucalyptus grandis
Eucgr.B01553 2.0kb upstream 2.0kb upstream 4090 true Chr02: 22905179-22909268 Eucalyptus grandis
Eucgr.B01553 2.0kb upstream 2.0kb upstream 2000 false Chr02: 22905179-22907178 Eucalyptus grandis
Eucgr.B01553 2.0kb downstream 2.0kb downstream 4090 true Chr02: 22907179-22911268 Eucalyptus grandis
Eucgr.B01553 2.0kb downstream 2.0kb downstream 2000 false Chr02: 22909269-22911268 Eucalyptus grandis
Eucgr.B01553 5.0kb upstream 5.0kb upstream 7090 true Chr02: 22902179-22909268 Eucalyptus grandis
Eucgr.B01553 5.0kb upstream 5.0kb upstream 5000 false Chr02: 22902179-22907178 Eucalyptus grandis
Eucgr.B01553 5.0kb downstream 5.0kb downstream 7090 true Chr02: 22907179-22914268 Eucalyptus grandis
Eucgr.B01553 5.0kb downstream 5.0kb downstream 5000 false Chr02: 22909269-22914268 Eucalyptus grandis
Eucgr.B01553 10.0kb upstream 10.0kb upstream 12090 true Chr02: 22897179-22909268 Eucalyptus grandis
Eucgr.B01553 10.0kb upstream 10.0kb upstream 10000 false Chr02: 22897179-22907178 Eucalyptus grandis
Eucgr.B01553 10.0kb downstream 10.0kb downstream 12090 true Chr02: 22907179-22919268 Eucalyptus grandis
Eucgr.B01553 10.0kb downstream 10.0kb downstream 10000 false Chr02: 22909269-22919268 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124062039 5270 Rosid View MSA
123752500 5271 Pentapetalae View MSA
122788518 5272 Eudicot View MSA
122051681 5273 Angiosperm View MSA
121312610 5274 Embryophyte View MSA
123349767 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.299798 0.0 1.01492 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain