Gene : Eucgr.B01442 E. grandis v2.0
Defline:  (1 of 1) KOG1548 - Transcription elongation factor TAT-SF1 Genomic Order:  1212
Name:  ? Eucgr.B01442 Secondary Identifier:  ? PAC:32060478
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.B01442 0.5kb upstream 0.5kb upstream 7719 true Chr02: 25205727-25213445 Eucalyptus grandis
Eucgr.B01442 0.5kb upstream 0.5kb upstream 500 false Chr02: 25212946-25213445 Eucalyptus grandis
Eucgr.B01442 0.5kb downstream 0.5kb downstream 7719 true Chr02: 25205227-25212945 Eucalyptus grandis
Eucgr.B01442 0.5kb downstream 0.5kb downstream 500 false Chr02: 25205227-25205726 Eucalyptus grandis
Eucgr.B01442 1.0kb upstream 1.0kb upstream 8219 true Chr02: 25205727-25213945 Eucalyptus grandis
Eucgr.B01442 1.0kb upstream 1.0kb upstream 1000 false Chr02: 25212946-25213945 Eucalyptus grandis
Eucgr.B01442 1.0kb downstream 1.0kb downstream 8219 true Chr02: 25204727-25212945 Eucalyptus grandis
Eucgr.B01442 1.0kb downstream 1.0kb downstream 1000 false Chr02: 25204727-25205726 Eucalyptus grandis
Eucgr.B01442 2.0kb upstream 2.0kb upstream 9219 true Chr02: 25205727-25214945 Eucalyptus grandis
Eucgr.B01442 2.0kb upstream 2.0kb upstream 2000 false Chr02: 25212946-25214945 Eucalyptus grandis
Eucgr.B01442 2.0kb downstream 2.0kb downstream 9219 true Chr02: 25203727-25212945 Eucalyptus grandis
Eucgr.B01442 2.0kb downstream 2.0kb downstream 2000 false Chr02: 25203727-25205726 Eucalyptus grandis
Eucgr.B01442 5.0kb upstream 5.0kb upstream 12219 true Chr02: 25205727-25217945 Eucalyptus grandis
Eucgr.B01442 5.0kb upstream 5.0kb upstream 5000 false Chr02: 25212946-25217945 Eucalyptus grandis
Eucgr.B01442 5.0kb downstream 5.0kb downstream 12219 true Chr02: 25200727-25212945 Eucalyptus grandis
Eucgr.B01442 5.0kb downstream 5.0kb downstream 5000 false Chr02: 25200727-25205726 Eucalyptus grandis
Eucgr.B01442 10.0kb upstream 10.0kb upstream 17219 true Chr02: 25205727-25222945 Eucalyptus grandis
Eucgr.B01442 10.0kb upstream 10.0kb upstream 10000 false Chr02: 25212946-25222945 Eucalyptus grandis
Eucgr.B01442 10.0kb downstream 10.0kb downstream 17219 true Chr02: 25195727-25212945 Eucalyptus grandis
Eucgr.B01442 10.0kb downstream 10.0kb downstream 10000 false Chr02: 25195727-25205726 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124064706 5270 Rosid View MSA
123741272 5271 Pentapetalae View MSA
122787667 5272 Eudicot View MSA
122045065 5273 Angiosperm View MSA
121347459 5274 Embryophyte View MSA
123427935 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.8295 0.0 30.7795    
cufflinks 14.5828 0.0 32.3912    
cufflinks 14.2242 0.0 31.6009    
cufflinks 17.0831 0.0 37.8145    
cufflinks 22.0776 0.0 48.8232   High
cufflinks 10.8818 0.0 24.4693   Low

0 Strain