Gene : Eucgr.B01443 E. grandis v2.0
Defline:  (1 of 235) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  1211
Name:  ? Eucgr.B01443 Secondary Identifier:  ? PAC:32061314
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.B01443 0.5kb upstream 0.5kb upstream 2449 true Chr02: 25184148-25186596 Eucalyptus grandis
Eucgr.B01443 0.5kb upstream 0.5kb upstream 500 false Chr02: 25186097-25186596 Eucalyptus grandis
Eucgr.B01443 0.5kb downstream 0.5kb downstream 2449 true Chr02: 25183648-25186096 Eucalyptus grandis
Eucgr.B01443 0.5kb downstream 0.5kb downstream 500 false Chr02: 25183648-25184147 Eucalyptus grandis
Eucgr.B01443 1.0kb upstream 1.0kb upstream 2949 true Chr02: 25184148-25187096 Eucalyptus grandis
Eucgr.B01443 1.0kb upstream 1.0kb upstream 1000 false Chr02: 25186097-25187096 Eucalyptus grandis
Eucgr.B01443 1.0kb downstream 1.0kb downstream 2949 true Chr02: 25183148-25186096 Eucalyptus grandis
Eucgr.B01443 1.0kb downstream 1.0kb downstream 1000 false Chr02: 25183148-25184147 Eucalyptus grandis
Eucgr.B01443 2.0kb upstream 2.0kb upstream 3949 true Chr02: 25184148-25188096 Eucalyptus grandis
Eucgr.B01443 2.0kb upstream 2.0kb upstream 2000 false Chr02: 25186097-25188096 Eucalyptus grandis
Eucgr.B01443 2.0kb downstream 2.0kb downstream 3949 true Chr02: 25182148-25186096 Eucalyptus grandis
Eucgr.B01443 2.0kb downstream 2.0kb downstream 2000 false Chr02: 25182148-25184147 Eucalyptus grandis
Eucgr.B01443 5.0kb upstream 5.0kb upstream 6949 true Chr02: 25184148-25191096 Eucalyptus grandis
Eucgr.B01443 5.0kb upstream 5.0kb upstream 5000 false Chr02: 25186097-25191096 Eucalyptus grandis
Eucgr.B01443 5.0kb downstream 5.0kb downstream 6949 true Chr02: 25179148-25186096 Eucalyptus grandis
Eucgr.B01443 5.0kb downstream 5.0kb downstream 5000 false Chr02: 25179148-25184147 Eucalyptus grandis
Eucgr.B01443 10.0kb upstream 10.0kb upstream 11949 true Chr02: 25184148-25196096 Eucalyptus grandis
Eucgr.B01443 10.0kb upstream 10.0kb upstream 10000 false Chr02: 25186097-25196096 Eucalyptus grandis
Eucgr.B01443 10.0kb downstream 10.0kb downstream 11949 true Chr02: 25174148-25186096 Eucalyptus grandis
Eucgr.B01443 10.0kb downstream 10.0kb downstream 10000 false Chr02: 25174148-25184147 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124067728 5270 Rosid View MSA
123742188 5271 Pentapetalae View MSA
122792936 5272 Eudicot View MSA
122045505 5273 Angiosperm View MSA
121310455 5274 Embryophyte View MSA
123347933 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.23862 0.0 12.8645    
cufflinks 0.0838859 0.0 0.351614 Low Low
cufflinks 6.41134 0.0 15.4633    
cufflinks 2.46632 0.0 6.52341    
cufflinks 1.98342 0.0 5.37563    
cufflinks 4.80879 0.0 11.8995    

0 Strain