Gene : Eucgr.B01429 E. grandis v2.0
Defline:  (1 of 2) PTHR11073:SF6 - CALRETICULIN-3 Genomic Order:  1223
Name:  ? Eucgr.B01429 Secondary Identifier:  ? PAC:32061101
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.B01429 0.5kb upstream 0.5kb upstream 5099 true Chr02: 25389807-25394905 Eucalyptus grandis
Eucgr.B01429 0.5kb upstream 0.5kb upstream 500 false Chr02: 25389807-25390306 Eucalyptus grandis
Eucgr.B01429 0.5kb downstream 0.5kb downstream 5099 true Chr02: 25390307-25395405 Eucalyptus grandis
Eucgr.B01429 0.5kb downstream 0.5kb downstream 500 false Chr02: 25394906-25395405 Eucalyptus grandis
Eucgr.B01429 1.0kb upstream 1.0kb upstream 5599 true Chr02: 25389307-25394905 Eucalyptus grandis
Eucgr.B01429 1.0kb upstream 1.0kb upstream 1000 false Chr02: 25389307-25390306 Eucalyptus grandis
Eucgr.B01429 1.0kb downstream 1.0kb downstream 5599 true Chr02: 25390307-25395905 Eucalyptus grandis
Eucgr.B01429 1.0kb downstream 1.0kb downstream 1000 false Chr02: 25394906-25395905 Eucalyptus grandis
Eucgr.B01429 2.0kb upstream 2.0kb upstream 6599 true Chr02: 25388307-25394905 Eucalyptus grandis
Eucgr.B01429 2.0kb upstream 2.0kb upstream 2000 false Chr02: 25388307-25390306 Eucalyptus grandis
Eucgr.B01429 2.0kb downstream 2.0kb downstream 6599 true Chr02: 25390307-25396905 Eucalyptus grandis
Eucgr.B01429 2.0kb downstream 2.0kb downstream 2000 false Chr02: 25394906-25396905 Eucalyptus grandis
Eucgr.B01429 5.0kb upstream 5.0kb upstream 9599 true Chr02: 25385307-25394905 Eucalyptus grandis
Eucgr.B01429 5.0kb upstream 5.0kb upstream 5000 false Chr02: 25385307-25390306 Eucalyptus grandis
Eucgr.B01429 5.0kb downstream 5.0kb downstream 9599 true Chr02: 25390307-25399905 Eucalyptus grandis
Eucgr.B01429 5.0kb downstream 5.0kb downstream 5000 false Chr02: 25394906-25399905 Eucalyptus grandis
Eucgr.B01429 10.0kb upstream 10.0kb upstream 14599 true Chr02: 25380307-25394905 Eucalyptus grandis
Eucgr.B01429 10.0kb upstream 10.0kb upstream 10000 false Chr02: 25380307-25390306 Eucalyptus grandis
Eucgr.B01429 10.0kb downstream 10.0kb downstream 14599 true Chr02: 25390307-25404905 Eucalyptus grandis
Eucgr.B01429 10.0kb downstream 10.0kb downstream 10000 false Chr02: 25394906-25404905 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124065658 5270 Rosid View MSA
123739640 5271 Pentapetalae View MSA
122789782 5272 Eudicot View MSA
122048001 5273 Angiosperm View MSA
121351092 5274 Embryophyte View MSA
123428269 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 76.78 0.0 205.069 High  
cufflinks 26.3946 0.0 64.5275    
cufflinks 83.6339 0.0 227.214 High High
cufflinks 26.0748 0.0 67.4424    
cufflinks 10.8054 0.0 25.1583   Low
cufflinks 45.6262 0.0 113.984 High  

0 Strain