Gene : Eucgr.B01375 E. grandis v2.0
Defline:  (1 of 4) PF03108//PF04434//PF10551 - MuDR family transposase (DBD_Tnp_Mut) // SWIM zinc finger (SWIM) // MULE transposase domain (MULE) Genomic Order:  1270
Name:  ? Eucgr.B01375 Secondary Identifier:  ? PAC:32058424
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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.B01375 0.5kb upstream 0.5kb upstream 5277 true Chr02: 26011143-26016419 Eucalyptus grandis
Eucgr.B01375 0.5kb upstream 0.5kb upstream 500 false Chr02: 26015920-26016419 Eucalyptus grandis
Eucgr.B01375 0.5kb downstream 0.5kb downstream 5277 true Chr02: 26010643-26015919 Eucalyptus grandis
Eucgr.B01375 0.5kb downstream 0.5kb downstream 500 false Chr02: 26010643-26011142 Eucalyptus grandis
Eucgr.B01375 1.0kb upstream 1.0kb upstream 5777 true Chr02: 26011143-26016919 Eucalyptus grandis
Eucgr.B01375 1.0kb upstream 1.0kb upstream 1000 false Chr02: 26015920-26016919 Eucalyptus grandis
Eucgr.B01375 1.0kb downstream 1.0kb downstream 5777 true Chr02: 26010143-26015919 Eucalyptus grandis
Eucgr.B01375 1.0kb downstream 1.0kb downstream 1000 false Chr02: 26010143-26011142 Eucalyptus grandis
Eucgr.B01375 2.0kb upstream 2.0kb upstream 6777 true Chr02: 26011143-26017919 Eucalyptus grandis
Eucgr.B01375 2.0kb upstream 2.0kb upstream 2000 false Chr02: 26015920-26017919 Eucalyptus grandis
Eucgr.B01375 2.0kb downstream 2.0kb downstream 6777 true Chr02: 26009143-26015919 Eucalyptus grandis
Eucgr.B01375 2.0kb downstream 2.0kb downstream 2000 false Chr02: 26009143-26011142 Eucalyptus grandis
Eucgr.B01375 5.0kb upstream 5.0kb upstream 9777 true Chr02: 26011143-26020919 Eucalyptus grandis
Eucgr.B01375 5.0kb upstream 5.0kb upstream 5000 false Chr02: 26015920-26020919 Eucalyptus grandis
Eucgr.B01375 5.0kb downstream 5.0kb downstream 9777 true Chr02: 26006143-26015919 Eucalyptus grandis
Eucgr.B01375 5.0kb downstream 5.0kb downstream 5000 false Chr02: 26006143-26011142 Eucalyptus grandis
Eucgr.B01375 10.0kb upstream 10.0kb upstream 14777 true Chr02: 26011143-26025919 Eucalyptus grandis
Eucgr.B01375 10.0kb upstream 10.0kb upstream 10000 false Chr02: 26015920-26025919 Eucalyptus grandis
Eucgr.B01375 10.0kb downstream 10.0kb downstream 14777 true Chr02: 26001143-26015919 Eucalyptus grandis
Eucgr.B01375 10.0kb downstream 10.0kb downstream 10000 false Chr02: 26001143-26011142 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124060728 5270 Rosid View MSA
123753345 5271 Pentapetalae View MSA
122797917 5272 Eudicot View MSA
122051679 5273 Angiosperm View MSA
121351767 5274 Embryophyte View MSA
123382313 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.01904 0.0 11.9173    
cufflinks 4.19179 0.0 10.0453   Low
cufflinks 6.95873 0.0 16.0438    
cufflinks 7.75031 0.0 17.6701    
cufflinks 5.91885 0.0 13.7893    
cufflinks 8.26305 0.0 18.8867   High

0 Strain