Gene : Eucgr.B01310 E. grandis v2.0
Defline:  (1 of 1) PTHR11777:SF7 - THREONYL AND ALANYL TRNA SYNTHETASE SECOND ADDITIONAL DOMAIN-CONTAINING PROTEIN Genomic Order:  1044
Name:  ? Eucgr.B01310 Secondary Identifier:  ? PAC:32060634
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis TRNA-CHARGING-PWY Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.B01310 0.5kb upstream 0.5kb upstream 5054 true Chr02: 20811875-20816928 Eucalyptus grandis
Eucgr.B01310 0.5kb upstream 0.5kb upstream 500 false Chr02: 20816429-20816928 Eucalyptus grandis
Eucgr.B01310 0.5kb downstream 0.5kb downstream 5054 true Chr02: 20811375-20816428 Eucalyptus grandis
Eucgr.B01310 0.5kb downstream 0.5kb downstream 500 false Chr02: 20811375-20811874 Eucalyptus grandis
Eucgr.B01310 1.0kb upstream 1.0kb upstream 5554 true Chr02: 20811875-20817428 Eucalyptus grandis
Eucgr.B01310 1.0kb upstream 1.0kb upstream 1000 false Chr02: 20816429-20817428 Eucalyptus grandis
Eucgr.B01310 1.0kb downstream 1.0kb downstream 5554 true Chr02: 20810875-20816428 Eucalyptus grandis
Eucgr.B01310 1.0kb downstream 1.0kb downstream 1000 false Chr02: 20810875-20811874 Eucalyptus grandis
Eucgr.B01310 2.0kb upstream 2.0kb upstream 6554 true Chr02: 20811875-20818428 Eucalyptus grandis
Eucgr.B01310 2.0kb upstream 2.0kb upstream 2000 false Chr02: 20816429-20818428 Eucalyptus grandis
Eucgr.B01310 2.0kb downstream 2.0kb downstream 6554 true Chr02: 20809875-20816428 Eucalyptus grandis
Eucgr.B01310 2.0kb downstream 2.0kb downstream 2000 false Chr02: 20809875-20811874 Eucalyptus grandis
Eucgr.B01310 5.0kb upstream 5.0kb upstream 9554 true Chr02: 20811875-20821428 Eucalyptus grandis
Eucgr.B01310 5.0kb upstream 5.0kb upstream 5000 false Chr02: 20816429-20821428 Eucalyptus grandis
Eucgr.B01310 5.0kb downstream 5.0kb downstream 9554 true Chr02: 20806875-20816428 Eucalyptus grandis
Eucgr.B01310 5.0kb downstream 5.0kb downstream 5000 false Chr02: 20806875-20811874 Eucalyptus grandis
Eucgr.B01310 10.0kb upstream 10.0kb upstream 14554 true Chr02: 20811875-20826428 Eucalyptus grandis
Eucgr.B01310 10.0kb upstream 10.0kb upstream 10000 false Chr02: 20816429-20826428 Eucalyptus grandis
Eucgr.B01310 10.0kb downstream 10.0kb downstream 14554 true Chr02: 20801875-20816428 Eucalyptus grandis
Eucgr.B01310 10.0kb downstream 10.0kb downstream 10000 false Chr02: 20801875-20811874 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041267 5273 Angiosperm View MSA
124061636 5270 Rosid View MSA
123736898 5271 Pentapetalae View MSA
122790717 5272 Eudicot View MSA
121346902 5274 Embryophyte View MSA
123425374 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.9147 0.0 23.6733    
cufflinks 10.7349 0.0 30.2865    
cufflinks 14.7751 0.0 47.4046    
cufflinks 7.57954 0.0 18.7439   Low
cufflinks 18.0564 0.0 43.0891   High
cufflinks 10.3149 0.0 28.9379    

0 Strain