Gene : Eucgr.B01313 E. grandis v2.0
Defline:  (1 of 3) KOG4748 - Subunit of Golgi mannosyltransferase complex Genomic Order:  1047
Name:  ? Eucgr.B01313 Secondary Identifier:  ? PAC:32061391
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-5936 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.B01313 0.5kb upstream 0.5kb upstream 2128 true Chr02: 20868574-20870701 Eucalyptus grandis
Eucgr.B01313 0.5kb upstream 0.5kb upstream 500 false Chr02: 20868574-20869073 Eucalyptus grandis
Eucgr.B01313 0.5kb downstream 0.5kb downstream 2128 true Chr02: 20869074-20871201 Eucalyptus grandis
Eucgr.B01313 0.5kb downstream 0.5kb downstream 500 false Chr02: 20870702-20871201 Eucalyptus grandis
Eucgr.B01313 1.0kb upstream 1.0kb upstream 2628 true Chr02: 20868074-20870701 Eucalyptus grandis
Eucgr.B01313 1.0kb upstream 1.0kb upstream 1000 false Chr02: 20868074-20869073 Eucalyptus grandis
Eucgr.B01313 1.0kb downstream 1.0kb downstream 2628 true Chr02: 20869074-20871701 Eucalyptus grandis
Eucgr.B01313 1.0kb downstream 1.0kb downstream 1000 false Chr02: 20870702-20871701 Eucalyptus grandis
Eucgr.B01313 2.0kb upstream 2.0kb upstream 3628 true Chr02: 20867074-20870701 Eucalyptus grandis
Eucgr.B01313 2.0kb upstream 2.0kb upstream 2000 false Chr02: 20867074-20869073 Eucalyptus grandis
Eucgr.B01313 2.0kb downstream 2.0kb downstream 3628 true Chr02: 20869074-20872701 Eucalyptus grandis
Eucgr.B01313 2.0kb downstream 2.0kb downstream 2000 false Chr02: 20870702-20872701 Eucalyptus grandis
Eucgr.B01313 5.0kb upstream 5.0kb upstream 6628 true Chr02: 20864074-20870701 Eucalyptus grandis
Eucgr.B01313 5.0kb upstream 5.0kb upstream 5000 false Chr02: 20864074-20869073 Eucalyptus grandis
Eucgr.B01313 5.0kb downstream 5.0kb downstream 6628 true Chr02: 20869074-20875701 Eucalyptus grandis
Eucgr.B01313 5.0kb downstream 5.0kb downstream 5000 false Chr02: 20870702-20875701 Eucalyptus grandis
Eucgr.B01313 10.0kb upstream 10.0kb upstream 11628 true Chr02: 20859074-20870701 Eucalyptus grandis
Eucgr.B01313 10.0kb upstream 10.0kb upstream 10000 false Chr02: 20859074-20869073 Eucalyptus grandis
Eucgr.B01313 10.0kb downstream 10.0kb downstream 11628 true Chr02: 20869074-20880701 Eucalyptus grandis
Eucgr.B01313 10.0kb downstream 10.0kb downstream 10000 false Chr02: 20870702-20880701 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124064369 5270 Rosid View MSA
123736946 5271 Pentapetalae View MSA
122789380 5272 Eudicot View MSA
122042255 5273 Angiosperm View MSA
121349054 5274 Embryophyte View MSA
123428220 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 33.8361 0.0 74.8278 High  
cufflinks 70.0024 0.0 156.984 High  
cufflinks 32.3407 0.0 71.5478 High  
cufflinks 135.495 0.0 316.888 High High
cufflinks 101.872 0.0 232.748 High  
cufflinks 34.2141 0.0 75.6651 High  

0 Strain