Gene : Eucgr.B01280 E. grandis v2.0
Defline:  (1 of 3) PTHR12506:SF27 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 34-RELATED Genomic Order:  1017
Name:  ? Eucgr.B01280 Secondary Identifier:  ? PAC:32060933
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.B01280 0.5kb upstream 0.5kb upstream 8087 true Chr02: 20310701-20318787 Eucalyptus grandis
Eucgr.B01280 0.5kb upstream 0.5kb upstream 500 false Chr02: 20318288-20318787 Eucalyptus grandis
Eucgr.B01280 0.5kb downstream 0.5kb downstream 8087 true Chr02: 20310201-20318287 Eucalyptus grandis
Eucgr.B01280 0.5kb downstream 0.5kb downstream 500 false Chr02: 20310201-20310700 Eucalyptus grandis
Eucgr.B01280 1.0kb upstream 1.0kb upstream 8587 true Chr02: 20310701-20319287 Eucalyptus grandis
Eucgr.B01280 1.0kb upstream 1.0kb upstream 1000 false Chr02: 20318288-20319287 Eucalyptus grandis
Eucgr.B01280 1.0kb downstream 1.0kb downstream 8587 true Chr02: 20309701-20318287 Eucalyptus grandis
Eucgr.B01280 1.0kb downstream 1.0kb downstream 1000 false Chr02: 20309701-20310700 Eucalyptus grandis
Eucgr.B01280 2.0kb upstream 2.0kb upstream 9587 true Chr02: 20310701-20320287 Eucalyptus grandis
Eucgr.B01280 2.0kb upstream 2.0kb upstream 2000 false Chr02: 20318288-20320287 Eucalyptus grandis
Eucgr.B01280 2.0kb downstream 2.0kb downstream 9587 true Chr02: 20308701-20318287 Eucalyptus grandis
Eucgr.B01280 2.0kb downstream 2.0kb downstream 2000 false Chr02: 20308701-20310700 Eucalyptus grandis
Eucgr.B01280 5.0kb upstream 5.0kb upstream 12587 true Chr02: 20310701-20323287 Eucalyptus grandis
Eucgr.B01280 5.0kb upstream 5.0kb upstream 5000 false Chr02: 20318288-20323287 Eucalyptus grandis
Eucgr.B01280 5.0kb downstream 5.0kb downstream 12587 true Chr02: 20305701-20318287 Eucalyptus grandis
Eucgr.B01280 5.0kb downstream 5.0kb downstream 5000 false Chr02: 20305701-20310700 Eucalyptus grandis
Eucgr.B01280 10.0kb upstream 10.0kb upstream 17587 true Chr02: 20310701-20328287 Eucalyptus grandis
Eucgr.B01280 10.0kb upstream 10.0kb upstream 10000 false Chr02: 20318288-20328287 Eucalyptus grandis
Eucgr.B01280 10.0kb downstream 10.0kb downstream 17587 true Chr02: 20300701-20318287 Eucalyptus grandis
Eucgr.B01280 10.0kb downstream 10.0kb downstream 10000 false Chr02: 20300701-20310700 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124065869 5270 Rosid View MSA
123744016 5271 Pentapetalae View MSA
122797715 5272 Eudicot View MSA
122047734 5273 Angiosperm View MSA
121348027 5274 Embryophyte View MSA
123428726 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.39534 0.0 19.0485    
cufflinks 4.79085 0.0 12.7509    
cufflinks 7.55335 0.0 19.0602    
cufflinks 4.37948 0.0 12.4842   Low
cufflinks 4.46799 0.0 12.3923    
cufflinks 7.43295 0.0 18.5068    

0 Strain