Gene : Eucgr.B01265 E. grandis v2.0
Defline:  (1 of 5) PTHR10625:SF102 - HISTONE DEACETYLASE 10 Genomic Order:  1002
Name:  ? Eucgr.B01265 Secondary Identifier:  ? PAC:32060811
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.B01265 0.5kb upstream 0.5kb upstream 7458 true Chr02: 19874450-19881907 Eucalyptus grandis
Eucgr.B01265 0.5kb upstream 0.5kb upstream 500 false Chr02: 19881408-19881907 Eucalyptus grandis
Eucgr.B01265 0.5kb downstream 0.5kb downstream 7458 true Chr02: 19873950-19881407 Eucalyptus grandis
Eucgr.B01265 0.5kb downstream 0.5kb downstream 500 false Chr02: 19873950-19874449 Eucalyptus grandis
Eucgr.B01265 1.0kb upstream 1.0kb upstream 7958 true Chr02: 19874450-19882407 Eucalyptus grandis
Eucgr.B01265 1.0kb upstream 1.0kb upstream 1000 false Chr02: 19881408-19882407 Eucalyptus grandis
Eucgr.B01265 1.0kb downstream 1.0kb downstream 7958 true Chr02: 19873450-19881407 Eucalyptus grandis
Eucgr.B01265 1.0kb downstream 1.0kb downstream 1000 false Chr02: 19873450-19874449 Eucalyptus grandis
Eucgr.B01265 2.0kb upstream 2.0kb upstream 8958 true Chr02: 19874450-19883407 Eucalyptus grandis
Eucgr.B01265 2.0kb upstream 2.0kb upstream 2000 false Chr02: 19881408-19883407 Eucalyptus grandis
Eucgr.B01265 2.0kb downstream 2.0kb downstream 8958 true Chr02: 19872450-19881407 Eucalyptus grandis
Eucgr.B01265 2.0kb downstream 2.0kb downstream 2000 false Chr02: 19872450-19874449 Eucalyptus grandis
Eucgr.B01265 5.0kb upstream 5.0kb upstream 11958 true Chr02: 19874450-19886407 Eucalyptus grandis
Eucgr.B01265 5.0kb upstream 5.0kb upstream 5000 false Chr02: 19881408-19886407 Eucalyptus grandis
Eucgr.B01265 5.0kb downstream 5.0kb downstream 11958 true Chr02: 19869450-19881407 Eucalyptus grandis
Eucgr.B01265 5.0kb downstream 5.0kb downstream 5000 false Chr02: 19869450-19874449 Eucalyptus grandis
Eucgr.B01265 10.0kb upstream 10.0kb upstream 16958 true Chr02: 19874450-19891407 Eucalyptus grandis
Eucgr.B01265 10.0kb upstream 10.0kb upstream 10000 false Chr02: 19881408-19891407 Eucalyptus grandis
Eucgr.B01265 10.0kb downstream 10.0kb downstream 16958 true Chr02: 19864450-19881407 Eucalyptus grandis
Eucgr.B01265 10.0kb downstream 10.0kb downstream 10000 false Chr02: 19864450-19874449 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124067905 5270 Rosid View MSA
123752884 5271 Pentapetalae View MSA
122793476 5272 Eudicot View MSA
122051091 5273 Angiosperm View MSA
121349302 5274 Embryophyte View MSA
123428156 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.01254 0.0 22.8198    
cufflinks 5.49159 0.0 12.9408    
cufflinks 9.52873 0.0 23.728    
cufflinks 1.96201 0.0 5.41467   Low
cufflinks 2.14726 0.0 5.84186   Low
cufflinks 8.21585 0.0 23.8816    

0 Strain