Gene : Eucgr.B01190 E. grandis v2.0
Defline:  (1 of 2) PTHR11570:SF1 - S-ADENOSYLMETHIONINE DECARBOXYLASE PROENZYME Genomic Order:  944
Name:  ? Eucgr.B01190 Secondary Identifier:  ? PAC:32060025
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis BSUBPOLYAMSYN-PWY Eucalyptus grandis pathologic  
Egrandis PWY-7528 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.B01190 0.5kb upstream 0.5kb upstream 1619 true Chr02: 18642209-18643827 Eucalyptus grandis
Eucgr.B01190 0.5kb upstream 0.5kb upstream 500 false Chr02: 18643328-18643827 Eucalyptus grandis
Eucgr.B01190 0.5kb downstream 0.5kb downstream 1619 true Chr02: 18641709-18643327 Eucalyptus grandis
Eucgr.B01190 0.5kb downstream 0.5kb downstream 500 false Chr02: 18641709-18642208 Eucalyptus grandis
Eucgr.B01190 1.0kb upstream 1.0kb upstream 2119 true Chr02: 18642209-18644327 Eucalyptus grandis
Eucgr.B01190 1.0kb upstream 1.0kb upstream 1000 false Chr02: 18643328-18644327 Eucalyptus grandis
Eucgr.B01190 1.0kb downstream 1.0kb downstream 2119 true Chr02: 18641209-18643327 Eucalyptus grandis
Eucgr.B01190 1.0kb downstream 1.0kb downstream 1000 false Chr02: 18641209-18642208 Eucalyptus grandis
Eucgr.B01190 2.0kb upstream 2.0kb upstream 3119 true Chr02: 18642209-18645327 Eucalyptus grandis
Eucgr.B01190 2.0kb upstream 2.0kb upstream 2000 false Chr02: 18643328-18645327 Eucalyptus grandis
Eucgr.B01190 2.0kb downstream 2.0kb downstream 3119 true Chr02: 18640209-18643327 Eucalyptus grandis
Eucgr.B01190 2.0kb downstream 2.0kb downstream 2000 false Chr02: 18640209-18642208 Eucalyptus grandis
Eucgr.B01190 5.0kb upstream 5.0kb upstream 6119 true Chr02: 18642209-18648327 Eucalyptus grandis
Eucgr.B01190 5.0kb upstream 5.0kb upstream 5000 false Chr02: 18643328-18648327 Eucalyptus grandis
Eucgr.B01190 5.0kb downstream 5.0kb downstream 6119 true Chr02: 18637209-18643327 Eucalyptus grandis
Eucgr.B01190 5.0kb downstream 5.0kb downstream 5000 false Chr02: 18637209-18642208 Eucalyptus grandis
Eucgr.B01190 10.0kb upstream 10.0kb upstream 11119 true Chr02: 18642209-18653327 Eucalyptus grandis
Eucgr.B01190 10.0kb upstream 10.0kb upstream 10000 false Chr02: 18643328-18653327 Eucalyptus grandis
Eucgr.B01190 10.0kb downstream 10.0kb downstream 11119 true Chr02: 18632209-18643327 Eucalyptus grandis
Eucgr.B01190 10.0kb downstream 10.0kb downstream 10000 false Chr02: 18632209-18642208 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124061070 5270 Rosid View MSA
123751266 5271 Pentapetalae View MSA
122795098 5272 Eudicot View MSA
122049143 5273 Angiosperm View MSA
121348944 5274 Embryophyte View MSA
123423800 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.631861 0.0 2.03942    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.214316 0.0 0.803372 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain