Gene : Eucgr.B01163 E. grandis v2.0
Defline:  (1 of 4) PTHR20852:SF53 - GLUTAMINE SYNTHETASE, CHLOROPLASTIC/MITOCHONDRIAL Genomic Order:  925
Name:  ? Eucgr.B01163 Secondary Identifier:  ? PAC:32059242
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis GLNSYN-PWY Eucalyptus grandis pathologic  
Egrandis PWY-3282 Eucalyptus grandis pathologic  
Egrandis PWY-381 Eucalyptus grandis pathologic  
Egrandis PWY-6549 Eucalyptus grandis pathologic  
Egrandis PWY-6963 Eucalyptus grandis pathologic  
Egrandis PWY-6964 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.B01163 0.5kb upstream 0.5kb upstream 11000 true Chr02: 17812652-17823651 Eucalyptus grandis
Eucgr.B01163 0.5kb upstream 0.5kb upstream 500 false Chr02: 17812652-17813151 Eucalyptus grandis
Eucgr.B01163 0.5kb downstream 0.5kb downstream 11000 true Chr02: 17813152-17824151 Eucalyptus grandis
Eucgr.B01163 0.5kb downstream 0.5kb downstream 500 false Chr02: 17823652-17824151 Eucalyptus grandis
Eucgr.B01163 1.0kb upstream 1.0kb upstream 11500 true Chr02: 17812152-17823651 Eucalyptus grandis
Eucgr.B01163 1.0kb upstream 1.0kb upstream 1000 false Chr02: 17812152-17813151 Eucalyptus grandis
Eucgr.B01163 1.0kb downstream 1.0kb downstream 11500 true Chr02: 17813152-17824651 Eucalyptus grandis
Eucgr.B01163 1.0kb downstream 1.0kb downstream 1000 false Chr02: 17823652-17824651 Eucalyptus grandis
Eucgr.B01163 2.0kb upstream 2.0kb upstream 12500 true Chr02: 17811152-17823651 Eucalyptus grandis
Eucgr.B01163 2.0kb upstream 2.0kb upstream 2000 false Chr02: 17811152-17813151 Eucalyptus grandis
Eucgr.B01163 2.0kb downstream 2.0kb downstream 12500 true Chr02: 17813152-17825651 Eucalyptus grandis
Eucgr.B01163 2.0kb downstream 2.0kb downstream 2000 false Chr02: 17823652-17825651 Eucalyptus grandis
Eucgr.B01163 5.0kb upstream 5.0kb upstream 15500 true Chr02: 17808152-17823651 Eucalyptus grandis
Eucgr.B01163 5.0kb upstream 5.0kb upstream 5000 false Chr02: 17808152-17813151 Eucalyptus grandis
Eucgr.B01163 5.0kb downstream 5.0kb downstream 15500 true Chr02: 17813152-17828651 Eucalyptus grandis
Eucgr.B01163 5.0kb downstream 5.0kb downstream 5000 false Chr02: 17823652-17828651 Eucalyptus grandis
Eucgr.B01163 10.0kb upstream 10.0kb upstream 20500 true Chr02: 17803152-17823651 Eucalyptus grandis
Eucgr.B01163 10.0kb upstream 10.0kb upstream 10000 false Chr02: 17803152-17813151 Eucalyptus grandis
Eucgr.B01163 10.0kb downstream 10.0kb downstream 20500 true Chr02: 17813152-17833651 Eucalyptus grandis
Eucgr.B01163 10.0kb downstream 10.0kb downstream 10000 false Chr02: 17823652-17833651 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124069672 5270 Rosid View MSA
123741738 5271 Pentapetalae View MSA
122788688 5272 Eudicot View MSA
122046528 5273 Angiosperm View MSA
121310618 5274 Embryophyte View MSA
123428761 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 25.2216 0.0 61.028    
cufflinks 37.1074 0.0 91.4416    
cufflinks 8.11103 0.0 21.4621    
cufflinks 26.6839 0.0 65.7559    
cufflinks 3.50601 0.0 10.4642   Low
cufflinks 59.6719 0.0 149.115 High High

0 Strain