Gene : Eucgr.B02002 E. grandis v2.0
Defline:  (1 of 1) PTHR28554:SF1 - 39S RIBOSOMAL PROTEIN L45, MITOCHONDRIAL Genomic Order:  1531
Name:  ? Eucgr.B02002 Secondary Identifier:  ? PAC:32058226
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.B02002 0.5kb upstream 0.5kb upstream 6190 true Chr02: 37225363-37231552 Eucalyptus grandis
Eucgr.B02002 0.5kb upstream 0.5kb upstream 500 false Chr02: 37225363-37225862 Eucalyptus grandis
Eucgr.B02002 0.5kb downstream 0.5kb downstream 6190 true Chr02: 37225863-37232052 Eucalyptus grandis
Eucgr.B02002 0.5kb downstream 0.5kb downstream 500 false Chr02: 37231553-37232052 Eucalyptus grandis
Eucgr.B02002 1.0kb upstream 1.0kb upstream 6690 true Chr02: 37224863-37231552 Eucalyptus grandis
Eucgr.B02002 1.0kb upstream 1.0kb upstream 1000 false Chr02: 37224863-37225862 Eucalyptus grandis
Eucgr.B02002 1.0kb downstream 1.0kb downstream 6690 true Chr02: 37225863-37232552 Eucalyptus grandis
Eucgr.B02002 1.0kb downstream 1.0kb downstream 1000 false Chr02: 37231553-37232552 Eucalyptus grandis
Eucgr.B02002 2.0kb upstream 2.0kb upstream 7690 true Chr02: 37223863-37231552 Eucalyptus grandis
Eucgr.B02002 2.0kb upstream 2.0kb upstream 2000 false Chr02: 37223863-37225862 Eucalyptus grandis
Eucgr.B02002 2.0kb downstream 2.0kb downstream 7690 true Chr02: 37225863-37233552 Eucalyptus grandis
Eucgr.B02002 2.0kb downstream 2.0kb downstream 2000 false Chr02: 37231553-37233552 Eucalyptus grandis
Eucgr.B02002 5.0kb upstream 5.0kb upstream 10690 true Chr02: 37220863-37231552 Eucalyptus grandis
Eucgr.B02002 5.0kb upstream 5.0kb upstream 5000 false Chr02: 37220863-37225862 Eucalyptus grandis
Eucgr.B02002 5.0kb downstream 5.0kb downstream 10690 true Chr02: 37225863-37236552 Eucalyptus grandis
Eucgr.B02002 5.0kb downstream 5.0kb downstream 5000 false Chr02: 37231553-37236552 Eucalyptus grandis
Eucgr.B02002 10.0kb upstream 10.0kb upstream 15690 true Chr02: 37215863-37231552 Eucalyptus grandis
Eucgr.B02002 10.0kb upstream 10.0kb upstream 10000 false Chr02: 37215863-37225862 Eucalyptus grandis
Eucgr.B02002 10.0kb downstream 10.0kb downstream 15690 true Chr02: 37225863-37241552 Eucalyptus grandis
Eucgr.B02002 10.0kb downstream 10.0kb downstream 10000 false Chr02: 37231553-37241552 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124050340 5270 Rosid View MSA
123738345 5271 Pentapetalae View MSA
122792875 5272 Eudicot View MSA
122048004 5273 Angiosperm View MSA
121346063 5274 Embryophyte View MSA
123424362 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.05795 0.0 21.8739   Low
cufflinks 10.373 0.0 34.2052    
cufflinks 8.29266 0.0 24.6528    
cufflinks 9.30873 0.0 27.3218    
cufflinks 15.799 0.0 41.4971   High
cufflinks 8.52722 0.0 26.0941    

0 Strain