Gene : Eucgr.B02012 E. grandis v2.0
Defline:  (1 of 1) PF03484 - tRNA synthetase B5 domain (B5) Genomic Order:  1538
Name:  ? Eucgr.B02012 Secondary Identifier:  ? PAC:32058421
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis TRNA-CHARGING-PWY Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.B02012 0.5kb upstream 0.5kb upstream 10282 true Chr02: 37437297-37447578 Eucalyptus grandis
Eucgr.B02012 0.5kb upstream 0.5kb upstream 500 false Chr02: 37437297-37437796 Eucalyptus grandis
Eucgr.B02012 0.5kb downstream 0.5kb downstream 10282 true Chr02: 37437797-37448078 Eucalyptus grandis
Eucgr.B02012 0.5kb downstream 0.5kb downstream 500 false Chr02: 37447579-37448078 Eucalyptus grandis
Eucgr.B02012 1.0kb upstream 1.0kb upstream 10782 true Chr02: 37436797-37447578 Eucalyptus grandis
Eucgr.B02012 1.0kb upstream 1.0kb upstream 1000 false Chr02: 37436797-37437796 Eucalyptus grandis
Eucgr.B02012 1.0kb downstream 1.0kb downstream 10782 true Chr02: 37437797-37448578 Eucalyptus grandis
Eucgr.B02012 1.0kb downstream 1.0kb downstream 1000 false Chr02: 37447579-37448578 Eucalyptus grandis
Eucgr.B02012 2.0kb upstream 2.0kb upstream 11782 true Chr02: 37435797-37447578 Eucalyptus grandis
Eucgr.B02012 2.0kb upstream 2.0kb upstream 2000 false Chr02: 37435797-37437796 Eucalyptus grandis
Eucgr.B02012 2.0kb downstream 2.0kb downstream 11782 true Chr02: 37437797-37449578 Eucalyptus grandis
Eucgr.B02012 2.0kb downstream 2.0kb downstream 2000 false Chr02: 37447579-37449578 Eucalyptus grandis
Eucgr.B02012 5.0kb upstream 5.0kb upstream 14782 true Chr02: 37432797-37447578 Eucalyptus grandis
Eucgr.B02012 5.0kb upstream 5.0kb upstream 5000 false Chr02: 37432797-37437796 Eucalyptus grandis
Eucgr.B02012 5.0kb downstream 5.0kb downstream 14782 true Chr02: 37437797-37452578 Eucalyptus grandis
Eucgr.B02012 5.0kb downstream 5.0kb downstream 5000 false Chr02: 37447579-37452578 Eucalyptus grandis
Eucgr.B02012 10.0kb upstream 10.0kb upstream 19782 true Chr02: 37427797-37447578 Eucalyptus grandis
Eucgr.B02012 10.0kb upstream 10.0kb upstream 10000 false Chr02: 37427797-37437796 Eucalyptus grandis
Eucgr.B02012 10.0kb downstream 10.0kb downstream 19782 true Chr02: 37437797-37457578 Eucalyptus grandis
Eucgr.B02012 10.0kb downstream 10.0kb downstream 10000 false Chr02: 37447579-37457578 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124062601 5270 Rosid View MSA
123738962 5271 Pentapetalae View MSA
122792851 5272 Eudicot View MSA
122042437 5273 Angiosperm View MSA
121345306 5274 Embryophyte View MSA
123425015 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 19.1415 0.0 43.2787    
cufflinks 17.6862 0.0 39.8297    
cufflinks 18.9253 0.0 42.5202    
cufflinks 21.0002 0.0 47.1254   High
cufflinks 17.728 0.0 43.9902    
cufflinks 12.8631 0.0 29.5654   Low

0 Strain