Gene : Eucgr.B01993 E. grandis v2.0
Defline:  (1 of 1) PTHR10457:SF4 - MEVALONATE KINASE Genomic Order:  1523
Name:  ? Eucgr.B01993 Secondary Identifier:  ? PAC:32060841
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-5910 Eucalyptus grandis pathologic  
Egrandis PWY-922 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.B01993 0.5kb upstream 0.5kb upstream 3973 true Chr02: 37015398-37019370 Eucalyptus grandis
Eucgr.B01993 0.5kb upstream 0.5kb upstream 500 false Chr02: 37018871-37019370 Eucalyptus grandis
Eucgr.B01993 0.5kb downstream 0.5kb downstream 3973 true Chr02: 37014898-37018870 Eucalyptus grandis
Eucgr.B01993 0.5kb downstream 0.5kb downstream 500 false Chr02: 37014898-37015397 Eucalyptus grandis
Eucgr.B01993 1.0kb upstream 1.0kb upstream 4473 true Chr02: 37015398-37019870 Eucalyptus grandis
Eucgr.B01993 1.0kb upstream 1.0kb upstream 1000 false Chr02: 37018871-37019870 Eucalyptus grandis
Eucgr.B01993 1.0kb downstream 1.0kb downstream 4473 true Chr02: 37014398-37018870 Eucalyptus grandis
Eucgr.B01993 1.0kb downstream 1.0kb downstream 1000 false Chr02: 37014398-37015397 Eucalyptus grandis
Eucgr.B01993 2.0kb upstream 2.0kb upstream 5473 true Chr02: 37015398-37020870 Eucalyptus grandis
Eucgr.B01993 2.0kb upstream 2.0kb upstream 2000 false Chr02: 37018871-37020870 Eucalyptus grandis
Eucgr.B01993 2.0kb downstream 2.0kb downstream 5473 true Chr02: 37013398-37018870 Eucalyptus grandis
Eucgr.B01993 2.0kb downstream 2.0kb downstream 2000 false Chr02: 37013398-37015397 Eucalyptus grandis
Eucgr.B01993 5.0kb upstream 5.0kb upstream 8473 true Chr02: 37015398-37023870 Eucalyptus grandis
Eucgr.B01993 5.0kb upstream 5.0kb upstream 5000 false Chr02: 37018871-37023870 Eucalyptus grandis
Eucgr.B01993 5.0kb downstream 5.0kb downstream 8473 true Chr02: 37010398-37018870 Eucalyptus grandis
Eucgr.B01993 5.0kb downstream 5.0kb downstream 5000 false Chr02: 37010398-37015397 Eucalyptus grandis
Eucgr.B01993 10.0kb upstream 10.0kb upstream 13473 true Chr02: 37015398-37028870 Eucalyptus grandis
Eucgr.B01993 10.0kb upstream 10.0kb upstream 10000 false Chr02: 37018871-37028870 Eucalyptus grandis
Eucgr.B01993 10.0kb downstream 10.0kb downstream 13473 true Chr02: 37005398-37018870 Eucalyptus grandis
Eucgr.B01993 10.0kb downstream 10.0kb downstream 10000 false Chr02: 37005398-37015397 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041242 5273 Angiosperm View MSA
124063522 5270 Rosid View MSA
123737750 5271 Pentapetalae View MSA
122787384 5272 Eudicot View MSA
121345229 5274 Embryophyte View MSA
123380177 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 20.7092 0.0 46.154    
cufflinks 26.9821 0.0 59.7851   High
cufflinks 9.57146 0.0 22.2935    
cufflinks 8.96991 0.0 21.002    
cufflinks 8.61799 0.0 20.3087    
cufflinks 16.9263 0.0 38.0614    

0 Strain