Gene : Eucgr.B01820 E. grandis v2.0
Defline:  (1 of 3) PTHR13683//PTHR13683:SF312 - ASPARTYL PROTEASES Genomic Order:  1339
Name:  ? Eucgr.B01820 Secondary Identifier:  ? PAC:32061911
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.B01820 0.5kb upstream 0.5kb upstream 4951 true Chr02: 28708279-28713229 Eucalyptus grandis
Eucgr.B01820 0.5kb upstream 0.5kb upstream 500 false Chr02: 28712730-28713229 Eucalyptus grandis
Eucgr.B01820 0.5kb downstream 0.5kb downstream 4951 true Chr02: 28707779-28712729 Eucalyptus grandis
Eucgr.B01820 0.5kb downstream 0.5kb downstream 500 false Chr02: 28707779-28708278 Eucalyptus grandis
Eucgr.B01820 1.0kb upstream 1.0kb upstream 5451 true Chr02: 28708279-28713729 Eucalyptus grandis
Eucgr.B01820 1.0kb upstream 1.0kb upstream 1000 false Chr02: 28712730-28713729 Eucalyptus grandis
Eucgr.B01820 1.0kb downstream 1.0kb downstream 5451 true Chr02: 28707279-28712729 Eucalyptus grandis
Eucgr.B01820 1.0kb downstream 1.0kb downstream 1000 false Chr02: 28707279-28708278 Eucalyptus grandis
Eucgr.B01820 2.0kb upstream 2.0kb upstream 6451 true Chr02: 28708279-28714729 Eucalyptus grandis
Eucgr.B01820 2.0kb upstream 2.0kb upstream 2000 false Chr02: 28712730-28714729 Eucalyptus grandis
Eucgr.B01820 2.0kb downstream 2.0kb downstream 6451 true Chr02: 28706279-28712729 Eucalyptus grandis
Eucgr.B01820 2.0kb downstream 2.0kb downstream 2000 false Chr02: 28706279-28708278 Eucalyptus grandis
Eucgr.B01820 5.0kb upstream 5.0kb upstream 9451 true Chr02: 28708279-28717729 Eucalyptus grandis
Eucgr.B01820 5.0kb upstream 5.0kb upstream 5000 false Chr02: 28712730-28717729 Eucalyptus grandis
Eucgr.B01820 5.0kb downstream 5.0kb downstream 9451 true Chr02: 28703279-28712729 Eucalyptus grandis
Eucgr.B01820 5.0kb downstream 5.0kb downstream 5000 false Chr02: 28703279-28708278 Eucalyptus grandis
Eucgr.B01820 10.0kb upstream 10.0kb upstream 14451 true Chr02: 28708279-28722729 Eucalyptus grandis
Eucgr.B01820 10.0kb upstream 10.0kb upstream 10000 false Chr02: 28712730-28722729 Eucalyptus grandis
Eucgr.B01820 10.0kb downstream 10.0kb downstream 14451 true Chr02: 28698279-28712729 Eucalyptus grandis
Eucgr.B01820 10.0kb downstream 10.0kb downstream 10000 false Chr02: 28698279-28708278 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124071127 5270 Rosid View MSA
123740338 5271 Pentapetalae View MSA
122795387 5272 Eudicot View MSA
122051849 5273 Angiosperm View MSA
121312739 5274 Embryophyte View MSA
123428778 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 27.483 0.0 60.8045    
cufflinks 8.13009 0.0 18.6403   Low
cufflinks 28.7579 0.0 63.6737 High  
cufflinks 37.6078 0.0 83.8186    
cufflinks 182.278 0.0 459.241 High High
cufflinks 11.4715 0.0 25.9082    

0 Strain