Gene : Eucgr.B01798 E. grandis v2.0
Defline:  (1 of 1) PTHR14732:SF0 - RNA POLYMERASE II SUBUNIT B1 CTD PHOSPHATASE RPAP2-RELATED Genomic Order:  1355
Name:  ? Eucgr.B01798 Secondary Identifier:  ? PAC:32061151
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.B01798 0.5kb upstream 0.5kb upstream 4706 true Chr02: 29193511-29198216 Eucalyptus grandis
Eucgr.B01798 0.5kb upstream 0.5kb upstream 500 false Chr02: 29193511-29194010 Eucalyptus grandis
Eucgr.B01798 0.5kb downstream 0.5kb downstream 4706 true Chr02: 29194011-29198716 Eucalyptus grandis
Eucgr.B01798 0.5kb downstream 0.5kb downstream 500 false Chr02: 29198217-29198716 Eucalyptus grandis
Eucgr.B01798 1.0kb upstream 1.0kb upstream 5206 true Chr02: 29193011-29198216 Eucalyptus grandis
Eucgr.B01798 1.0kb upstream 1.0kb upstream 1000 false Chr02: 29193011-29194010 Eucalyptus grandis
Eucgr.B01798 1.0kb downstream 1.0kb downstream 5206 true Chr02: 29194011-29199216 Eucalyptus grandis
Eucgr.B01798 1.0kb downstream 1.0kb downstream 1000 false Chr02: 29198217-29199216 Eucalyptus grandis
Eucgr.B01798 2.0kb upstream 2.0kb upstream 6206 true Chr02: 29192011-29198216 Eucalyptus grandis
Eucgr.B01798 2.0kb upstream 2.0kb upstream 2000 false Chr02: 29192011-29194010 Eucalyptus grandis
Eucgr.B01798 2.0kb downstream 2.0kb downstream 6206 true Chr02: 29194011-29200216 Eucalyptus grandis
Eucgr.B01798 2.0kb downstream 2.0kb downstream 2000 false Chr02: 29198217-29200216 Eucalyptus grandis
Eucgr.B01798 5.0kb upstream 5.0kb upstream 9206 true Chr02: 29189011-29198216 Eucalyptus grandis
Eucgr.B01798 5.0kb upstream 5.0kb upstream 5000 false Chr02: 29189011-29194010 Eucalyptus grandis
Eucgr.B01798 5.0kb downstream 5.0kb downstream 9206 true Chr02: 29194011-29203216 Eucalyptus grandis
Eucgr.B01798 5.0kb downstream 5.0kb downstream 5000 false Chr02: 29198217-29203216 Eucalyptus grandis
Eucgr.B01798 10.0kb upstream 10.0kb upstream 14206 true Chr02: 29184011-29198216 Eucalyptus grandis
Eucgr.B01798 10.0kb upstream 10.0kb upstream 10000 false Chr02: 29184011-29194010 Eucalyptus grandis
Eucgr.B01798 10.0kb downstream 10.0kb downstream 14206 true Chr02: 29194011-29208216 Eucalyptus grandis
Eucgr.B01798 10.0kb downstream 10.0kb downstream 10000 false Chr02: 29198217-29208216 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124069329 5270 Rosid View MSA
123741473 5271 Pentapetalae View MSA
122794606 5272 Eudicot View MSA
122046248 5273 Angiosperm View MSA
121347996 5274 Embryophyte View MSA
123426503 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.1232 0.0 33.501    
cufflinks 15.6683 0.0 34.7007   High
cufflinks 4.25399 0.0 10.1362   Low
cufflinks 6.46245 0.0 14.823    
cufflinks 4.37335 0.0 10.3751   Low
cufflinks 12.6598 0.0 28.1551    

0 Strain