Gene : Eucgr.B01772 E. grandis v2.0
Defline:  (1 of 5) PTHR12899:SF5 - RIBOSOMAL L18P/L5E FAMILY PROTEIN Genomic Order:  1576
Name:  ? Eucgr.B01772 Secondary Identifier:  ? PAC:32061013
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.B01772 0.5kb upstream 0.5kb upstream 2358 true Chr02: 38409759-38412116 Eucalyptus grandis
Eucgr.B01772 0.5kb upstream 0.5kb upstream 500 false Chr02: 38411617-38412116 Eucalyptus grandis
Eucgr.B01772 0.5kb downstream 0.5kb downstream 2358 true Chr02: 38409259-38411616 Eucalyptus grandis
Eucgr.B01772 0.5kb downstream 0.5kb downstream 500 false Chr02: 38409259-38409758 Eucalyptus grandis
Eucgr.B01772 1.0kb upstream 1.0kb upstream 2858 true Chr02: 38409759-38412616 Eucalyptus grandis
Eucgr.B01772 1.0kb upstream 1.0kb upstream 1000 false Chr02: 38411617-38412616 Eucalyptus grandis
Eucgr.B01772 1.0kb downstream 1.0kb downstream 2858 true Chr02: 38408759-38411616 Eucalyptus grandis
Eucgr.B01772 1.0kb downstream 1.0kb downstream 1000 false Chr02: 38408759-38409758 Eucalyptus grandis
Eucgr.B01772 2.0kb upstream 2.0kb upstream 3858 true Chr02: 38409759-38413616 Eucalyptus grandis
Eucgr.B01772 2.0kb upstream 2.0kb upstream 2000 false Chr02: 38411617-38413616 Eucalyptus grandis
Eucgr.B01772 2.0kb downstream 2.0kb downstream 3858 true Chr02: 38407759-38411616 Eucalyptus grandis
Eucgr.B01772 2.0kb downstream 2.0kb downstream 2000 false Chr02: 38407759-38409758 Eucalyptus grandis
Eucgr.B01772 5.0kb upstream 5.0kb upstream 6858 true Chr02: 38409759-38416616 Eucalyptus grandis
Eucgr.B01772 5.0kb upstream 5.0kb upstream 5000 false Chr02: 38411617-38416616 Eucalyptus grandis
Eucgr.B01772 5.0kb downstream 5.0kb downstream 6858 true Chr02: 38404759-38411616 Eucalyptus grandis
Eucgr.B01772 5.0kb downstream 5.0kb downstream 5000 false Chr02: 38404759-38409758 Eucalyptus grandis
Eucgr.B01772 10.0kb upstream 10.0kb upstream 11858 true Chr02: 38409759-38421616 Eucalyptus grandis
Eucgr.B01772 10.0kb upstream 10.0kb upstream 10000 false Chr02: 38411617-38421616 Eucalyptus grandis
Eucgr.B01772 10.0kb downstream 10.0kb downstream 11858 true Chr02: 38399759-38411616 Eucalyptus grandis
Eucgr.B01772 10.0kb downstream 10.0kb downstream 10000 false Chr02: 38399759-38409758 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124063068 5270 Rosid View MSA
123738575 5271 Pentapetalae View MSA
122789251 5272 Eudicot View MSA
122043633 5273 Angiosperm View MSA
121351328 5274 Embryophyte View MSA
123382121 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.03728 0.0 22.0891    
cufflinks 3.17602 0.0 8.54253   Low
cufflinks 7.67794 0.0 19.0308    
cufflinks 7.22472 0.0 17.9534    
cufflinks 10.6138 0.0 25.4708    
cufflinks 11.1124 0.0 26.7749    

0 Strain